RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SSX7Q7RTT5 188 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 CLRN3Q8NCR9 226 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 ORAI1Q96D31 301 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 CMTM5Q96DZ9 223 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 C4orf36Q96KX1 117 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 ZNF184Q99676 751 aaPredicted RBP5.03□□□□□ -1.6
VCAN-207ENST00000507162 ELAC2Q9BQ52 826 aaKnown RBP5.03□□□□□ -1.6
VCAN-207ENST00000507162 RIBC2Q9H4K1 309 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 SDHAF2Q9NX18 166 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 ZNF586Q9NXT0 402 aa5.03□□□□□ -1.6
VCAN-207ENST00000507162 TRAV14DV4A0A0A6YYC5 116 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 IGHV3-66A0A0C4DH42 116 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 TCRBV5S2A0A599 114 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 TMEM212A6NML5 194 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 C15orf62A8K5M9 175 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 ST8SIA3O43173 380 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 CD2P06729 351 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 EIF4EP06730 217 aaKnown RBP5.02□□□□□ -1.61
VCAN-207ENST00000507162 CRHBPP24387 322 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 ERVFC1-1P60608 527 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 ODF1Q14990 250 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 AWAT2Q6E213 333 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 CGB2Q6NT52 195 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 LRRTM1Q86UE6 522 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 VKORC1L1Q8N0U8 176 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 JAGN1Q8N5M9 183 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 UBAC2Q8NBM4 344 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.02□□□□□ -1.61
VCAN-207ENST00000507162 DUSP18Q8NEJ0 188 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 PTX4Q96A99 478 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 ATP6V1G3Q96LB4 118 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 OR2D2Q9H210 308 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 OR51E2Q9H255 320 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 RDH8Q9NYR8 311 aa5.02□□□□□ -1.61
VCAN-207ENST00000507162 RBM7Q9Y580 266 aaKnown RBP5.02□□□□□ -1.61
VCAN-207ENST00000507162 TEX48A0A1B0GUV7 120 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 E9PI62 339 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 F5H768 121 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 NUPL2O15504 423 aaKnown RBP5.01□□□□□ -1.61
VCAN-207ENST00000507162 FCGR3BO75015 233 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 P0C879 139 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 ZNF735P0CB33 412 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 RAP2AP10114 183 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 OXA1LQ15070 435 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 RNASE12Q5GAN4 147 aaKnown RBP5.01□□□□□ -1.61
VCAN-207ENST00000507162 SPSB3Q6PJ21 355 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 C6orf201Q7Z4U5 140 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 OSR1Q8TAX0 266 aaPredicted RBP5.01□□□□□ -1.61
VCAN-207ENST00000507162 BSCL2Q96G97 398 aaPredicted RBP5.01□□□□□ -1.61
VCAN-207ENST00000507162 Q96M66 194 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 UHRF2Q96PU4 802 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 C1QTNF4Q9BXJ3 329 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 Q9H3A6 140 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 THYN1Q9P016 225 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 RFNGQ9Y644 331 aa5.01□□□□□ -1.61
VCAN-207ENST00000507162 SMIM9A6NGZ8 99 aa5□□□□□ -1.61
VCAN-207ENST00000507162 DCTN3O75935 186 aa5□□□□□ -1.61
VCAN-207ENST00000507162 ZNF688P0C7X2 276 aa5□□□□□ -1.61
VCAN-207ENST00000507162 DNAH10OSP0CZ25 163 aa5□□□□□ -1.61
VCAN-207ENST00000507162 DAPP51397 102 aa5□□□□□ -1.61
VCAN-207ENST00000507162 LINC00315P59091 139 aa5□□□□□ -1.61
VCAN-207ENST00000507162 NUTF2P61970 127 aaKnown RBP5□□□□□ -1.61
VCAN-207ENST00000507162 KLK9Q2XQG4 91 aa5□□□□□ -1.61
VCAN-207ENST00000507162 Q56UQ5 140 aa5□□□□□ -1.61
VCAN-207ENST00000507162 OR2G6Q5TZ20 316 aa5□□□□□ -1.61
VCAN-207ENST00000507162 C12orf73Q69YU5 71 aa5□□□□□ -1.61
VCAN-207ENST00000507162 SLC25A24Q6NUK1 477 aa5□□□□□ -1.61
VCAN-207ENST00000507162 LHFPL3Q86UP9 236 aa5□□□□□ -1.61
VCAN-207ENST00000507162 DHFR2Q86XF0 187 aa5□□□□□ -1.61
VCAN-207ENST00000507162 VN1R17PQ8TDU5 208 aa5□□□□□ -1.61
VCAN-207ENST00000507162 GPR148Q8TDV2 347 aa5□□□□□ -1.61
VCAN-207ENST00000507162 ST8SIA2Q92186 375 aa5□□□□□ -1.61
VCAN-207ENST00000507162 C5orf30Q96GV9 206 aa5□□□□□ -1.61
VCAN-207ENST00000507162 ZNF414Q96IQ9 312 aa5□□□□□ -1.61
VCAN-207ENST00000507162 RAB40CQ96S21 281 aa5□□□□□ -1.61
VCAN-207ENST00000507162 RIMS4Q9H426 269 aaPredicted RBP5□□□□□ -1.61
VCAN-207ENST00000507162 FNDC4Q9H6D8 234 aaPredicted RBP5□□□□□ -1.61
VCAN-207ENST00000507162 Q9N2K0 584 aa5□□□□□ -1.61
VCAN-207ENST00000507162 KLK9Q9UKQ9 250 aa5□□□□□ -1.61
VCAN-207ENST00000507162 RAB21Q9UL25 225 aa5□□□□□ -1.61
VCAN-207ENST00000507162 LINC00473A8K010 186 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 BET1O15155 118 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 PAX4O43316 350 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 NAPSAO96009 420 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 CD5P06127 495 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 CD3GP09693 182 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 GBX2P52951 348 aaPredicted RBP4.99□□□□□ -1.61
VCAN-207ENST00000507162 FXYD7P58549 80 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 HLA-DRB3P79483 266 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 TMED1Q13445 227 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 IRF3Q14653 427 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 OR2B11Q5JQS5 317 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 ZNF880Q6PDB4 577 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 MOB1BQ7L9L4 216 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 DEFB107AQ8IZN7 70 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 ACBD7Q8N6N7 88 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 STXBP6Q8NFX7 210 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 OR8J1Q8NGP2 316 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 RFKQ969G6 155 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 DGCR14Q96DF8 476 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms