RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 FANCD2OSQ96PS1 177 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 ATP6V0BQ99437 205 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 ZC4H2Q9NQZ6 224 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 ADAM30Q9UKF2 790 aa10.94□□□□□ -0.66
HMGCS1-203ENST00000507004 C2orf70A6NJV1 201 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 A8MWP6 167 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 UPK2O00526 184 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 TNFSF12O43508 249 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 FOLR2P14207 255 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 FXYD4P59646 89 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 CD81P60033 236 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 HAGHQ16775 308 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 DEFB114Q30KQ6 69 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 ANKRD55Q3KP44 614 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 CD300EQ496F6 205 aaPredicted RBP10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 TMEM69Q5SWH9 247 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 LPCAT3Q6P1A2 487 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 SLC16A13Q7RTY0 426 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 DMBX1Q8NFW5 382 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 NEURL2Q9BR09 285 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 RNF167Q9H6Y7 350 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 EHFQ9NZC4 300 aa10.93□□□□□ -0.66
HMGCS1-203ENST00000507004 IGLV11-55A0A075B6I3 123 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 SULT1C2O00338 296 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 NDUFB8O95169 186 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 TNFAIP8O95379 198 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 AREGP15514 252 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 ELLP55199 621 aaPredicted RBP10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 OR2B8PP59922 312 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 TMEM17Q86X19 198 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 OR1L6Q8NGR2 347 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 OR5H2Q8NGV7 314 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 MOB3AQ96BX8 217 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 QTRT1Q9BXR0 403 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 EDA2RQ9HAV5 297 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 FAM212BQ9NTI7 297 aaPredicted RBP10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 TMEM140Q9NV12 185 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 ANAPC10Q9UM13 185 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 DMRT1Q9Y5R6 373 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 CEPT1Q9Y6K0 416 aa10.92□□□□□ -0.66
HMGCS1-203ENST00000507004 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 TRAV25A0A0B4J276 109 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 SMIM31A0A1B0GVY4 71 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 PPP5D1E7EU14 171 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 E7EUB6 86 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 OR2C1O95371 312 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 NAT1P18440 290 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 CBLN1P23435 193 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 F2RP25116 425 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 PTBP1P26599 531 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 PRSS3P35030 304 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 CLEC19AQ6UXS0 136 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 ZNF818PQ6ZRF7 136 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 SAMD12Q8N8I0 201 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 OR1L8Q8NGR8 309 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 OR6F1Q8NGZ6 308 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 OR51H1Q8NH63 302 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 VN1R17PQ8TDU5 208 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 CCDC140Q96MF4 163 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 TSC22D3Q99576 134 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 FKBP11Q9NYL4 201 aa10.91□□□□□ -0.66
HMGCS1-203ENST00000507004 NBEAL2Q6ZNJ1 2754 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 IZUMO1RA6ND01 250 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 ZNF785A8K8V0 405 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 SNAPC5O75971 98 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 TRAPPC2P0DI81 140 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 TRAPPC2BP0DI82 140 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 MYOD1P15172 320 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 GNRHRP30968 328 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 RPS19P39019 145 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 TAS2R20P59543 309 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 GUCA2BQ16661 112 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 ZNF57Q68EA5 555 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 LINC00322Q6ZN03 302 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 TSPAN14Q8NG11 270 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 YIPF6Q96EC8 236 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 ZNF2Q9BSG1 426 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 SCPEP1Q9HB40 452 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 GAR1Q9NY12 217 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 MRPL27Q9P0M9 148 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 UFC1Q9Y3C8 167 aa10.9□□□□□ -0.66
HMGCS1-203ENST00000507004 A0A1B0GW64 132 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 IGLC7A0M8Q6 106 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 ZNF320A2RRD8 509 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 MARCH11A6NNE9 402 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 GPR31O00270 319 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 PGLYRP1O75594 196 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 APOA1P02647 267 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 CLEC3BP05452 202 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 PTHLHP12272 177 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 SPSB3Q6PJ21 355 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 PLET1Q6UQ28 207 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 ADAMTSL5Q6ZMM2 481 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 GDPD1Q8N9F7 314 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 OR5B3Q8NH48 314 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 LSM10Q969L4 123 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 SLC25A46Q96AG3 418 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 DGCR14Q96DF8 476 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 TMEM56Q96MV1 263 aa10.89□□□□□ -0.67
HMGCS1-203ENST00000507004 GPHA2Q96T91 129 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms