RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 CCR7P32248 378 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 MAP2K4P45985 399 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 NKX2-5P52952 324 aaPredicted RBP0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 DEFA3P59666 94 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 POLR2GP62487 172 aaKnown RBP eCLIP0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 RPL30P62888 115 aaKnown RBP0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 BASP1P80723 227 aaKnown RBP0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 ELOBQ15370 118 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 DCXRQ7Z4W1 244 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 MED12LQ86YW9 2145 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 GID4Q8IVV7 300 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 KRT222Q8N1A0 295 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 UMODL1-AS1Q8N2C9 162 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 LINC00471Q8N535 108 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 ZNF439Q8NDP4 499 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 ST6GALNAC3Q8NDV1 305 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 OR2T27Q8NH04 317 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 SGMS2Q8NHU3 365 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 DNAJB3Q8WWF6 145 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 TESCQ96BS2 214 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 GNPNAT1Q96EK6 184 aaPredicted RBP0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 CCL13Q99616 98 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 KIFC1Q9BW19 673 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 OR8D2Q9GZM6 311 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 DERL2Q9GZP9 239 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 CXorf21Q9HAI6 301 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 ZCCHC6Q5VYS8 1495 aaKnown RBP0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 DOCK3Q8IZD9 2030 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 EXPH5Q8NEV8 1989 aa0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 EIF4G1Q04637 1599 aaKnown RBP0.45□□□□□ -2.34
CDC42SE2-210ENST00000506929 MEIKINA0A087WXM9 373 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 MEIS3P1A6NDR6 274 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 FABP12A6NFH5 140 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 TRPC5OSA6NMA1 111 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 GOLGA8KD6RF30 607 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 H0YJX3 145 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 PGRMC1O00264 195 aaKnown RBP0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 CREBL2O60519 120 aaPredicted RBP0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 PIAS1O75925 651 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 HLA-DRAP01903 254 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 FABP1P07148 127 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 RPS17P08708 135 aaKnown RBP0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 NEFHP12036 1026 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 PSMB8P28062 276 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 S100A5P33763 92 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 SLCO1A2P46721 670 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 REG1BP48304 166 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 EVX1P49640 407 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 FKBP1AP62942 108 aaKnown RBP0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 PSPHP78330 225 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 COTL1Q14019 142 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 TAF1AQ15573 450 aaPredicted RBP0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 CCSMST1Q4G0I0 132 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 PDPK2PQ6A1A2 396 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 CLEC6AQ6EIG7 209 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 SCIMPQ6UWF3 145 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 SNX29P2Q8IUI4 249 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 CLVS1Q8IUQ0 354 aaPredicted RBP0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 C10orf67Q8IYJ2 551 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 LRRC18Q8N456 261 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 OR2T4Q8NH00 348 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 ASB13Q8WXK3 278 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 ACOT12Q8WYK0 555 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 C8orf76Q96K31 380 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 ATP6V1G3Q96LB4 118 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 PACRGQ96M98 296 aaPredicted RBP0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 HOPXQ9BPY8 73 aaPredicted RBP0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 C9orf16Q9BUW7 83 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 YIPF3Q9GZM5 350 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 CHST6Q9GZX3 395 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 PSTPIP2Q9H939 334 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 MED9Q9NWA0 146 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 CD300AQ9UGN4 299 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 HECW1Q76N89 1606 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 LAMB4A4D0S4 1761 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 MAST2Q6P0Q8 1798 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 SMARCA2P51531 1590 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 TONSLQ96HA7 1378 aa0.44□□□□□ -2.34
CDC42SE2-210ENST00000506929 KIF1BO60333 1816 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 TNRC6BQ9UPQ9 1833 aaKnown RBP0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 EVC2Q86UK5 1308 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 UQCRHLA0A096LP55 91 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 FUOMA2VDF0 154 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 C5orf49A4QMS7 147 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 SMIM23A6NLE4 172 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 TMEM212A6NML5 194 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 IQCF5A8MTL0 148 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 EVPLLA8MZ36 301 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 TMEM238C9JI98 176 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 ATP6V1G2-DDX39BF2Z307 99 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 CETN3O15182 167 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 SLC16A4O15374 487 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 YKT6O15498 198 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 ARPC5O15511 151 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 ATP8B1O43520 1251 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 E2F6O75461 281 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 S100A6P06703 90 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 UQCRHP07919 91 aa0.43□□□□□ -2.34
CDC42SE2-210ENST00000506929 CD40LGP29965 261 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms