RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SRSF12Q8WXF0 261 aaKnown RBP10.08□□□□□ -0.8
TCOF1-210ENST00000506767 LSM10Q969L4 123 aaKnown RBP10.08□□□□□ -0.8
TCOF1-210ENST00000506767 FBN3Q75N90 2809 aa10.08□□□□□ -0.8
TCOF1-210ENST00000506767 A0A0B4J2A0 478 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 A0A0G2JRQ6 117 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 A0A1B0GW64 132 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 PSMB11A5LHX3 300 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 MSGN1A6NI15 193 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 CGB1A6NKQ9 187 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 ACTL6BO94805 426 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 H2AFB2P0C5Z0 115 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 MYOD1P15172 320 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 VDAC1P21796 283 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 AKR1C2P52895 323 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 TMEM267Q0VDI3 215 aaPredicted RBP10.07□□□□□ -0.8
TCOF1-210ENST00000506767 DHRS2Q13268 280 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 C10orf55Q5SWW7 151 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 Q6ZRM9 215 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 LYG2Q86SG7 212 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 SLC35G3Q8N808 338 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 LFNGQ8NES3 379 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 OR5AU1Q8NGC0 362 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 GRPEL2Q8TAA5 225 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 TMEM68Q96MH6 324 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 CITED1Q99966 193 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 TMEM14BQ9NUH8 114 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 SHPKQ9UHJ6 478 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 WSB1Q9Y6I7 421 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 TNCP24821 2201 aa10.07□□□□□ -0.8
TCOF1-210ENST00000506767 A0A0B4J293 547 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 PIGBOS1A0A0B4J2F0 54 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 TEX50A0A1B0GTY4 177 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 DBX1A6NMT0 343 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 C15orf61A6NNL5 157 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 TEX22C9J3V5 150 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 SNAPC5O75971 98 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 DUS4LO95620 317 aaKnown RBP10.06□□□□□ -0.8
TCOF1-210ENST00000506767 IGLV1-40P01703 118 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 IGHG4P01861 327 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 HLA-AP01891 365 aaKnown RBP10.06□□□□□ -0.8
TCOF1-210ENST00000506767 RPL27AP46776 148 aaKnown RBP10.06□□□□□ -0.8
TCOF1-210ENST00000506767 OR2B8PP59922 312 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 SLC35B1P78383 322 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
TCOF1-210ENST00000506767 IZUMO4Q1ZYL8 232 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 AARDQ4LEZ3 155 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 C4orf46Q504U0 113 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 NMSQ5H8A3 153 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 TCTEX1D4Q5JR98 221 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 UNQ5815/PRO19632Q6UWF5 114 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 LYZL2Q7Z4W2 148 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 ZNF429Q86V71 674 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 COMMD1Q8N668 190 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 C3orf56Q8N813 242 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 ABHD5Q8WTS1 349 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 CASTOR1Q8WTX7 329 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 GPR146Q96CH1 333 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 RRNAD1Q96FB5 475 aaKnown RBP10.06□□□□□ -0.8
TCOF1-210ENST00000506767 MARVELD1Q9BSK0 173 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 COMMD5Q9GZQ3 224 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 FKBP11Q9NYL4 201 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 PRNDQ9UKY0 176 aa10.06□□□□□ -0.8
TCOF1-210ENST00000506767 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-210ENST00000506767 SOX15O60248 233 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 OPN1MWP04001 364 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 IL5P05113 134 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 OPN1MW2P0DN77 364 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 OPN1MW3P0DN78 364 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 CD28P10747 220 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 CD83Q01151 205 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 DCTN2Q13561 401 aaKnown RBP10.05□□□□□ -0.8
TCOF1-210ENST00000506767 ECSCRQ19T08 205 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 TEX38Q6PEX7 206 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 RNF152Q8N8N0 203 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 OR52B4Q8NGK2 314 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 OR5B3Q8NH48 314 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 OR4A16Q8NH70 328 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 MITD1Q8WV92 249 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 SPIN2AQ99865 258 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 SPIN2BQ9BPZ2 258 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 NDUFA4L2Q9NRX3 87 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 ZNF257Q9Y2Q1 563 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 OR51B2Q9Y5P1 312 aa10.05□□□□□ -0.8
TCOF1-210ENST00000506767 TET2Q6N021 2002 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-210ENST00000506767 A0A1W2PN81 502 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 HMX3A6NHT5 357 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 FBXO24O75426 580 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 BRI3O95415 125 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 PTTG1O95997 202 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 ELANEP08246 267 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 SPNP16150 400 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 PSMB8P28062 276 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 CHRNA7P36544 502 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 RAB25P57735 213 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 FOXE3Q13461 319 aa10.04□□□□□ -0.8
TCOF1-210ENST00000506767 THOC7Q6I9Y2 204 aaKnown RBP10.04□□□□□ -0.8
TCOF1-210ENST00000506767 PLET1Q6UQ28 207 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms