RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SNX24Q9Y343 169 aa3.29□□□□□ -1.88
HERC4-213ENST00000506515 POLR3HQ9Y535 204 aaPredicted RBP3.29□□□□□ -1.88
HERC4-213ENST00000506515 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 TMEM72A0PK05 275 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 A8MT66 165 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 CENPXA8MT69 81 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 ZNF879B4DU55 563 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 GATBO75879 557 aaKnown RBP3.28□□□□□ -1.88
HERC4-213ENST00000506515 KRT75O95678 551 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 PTTG1O95997 202 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 IGHV1-46P01743 117 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 MBP02144 154 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 PRKACAP17612 351 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 GDI2P50395 445 aaKnown RBP3.28□□□□□ -1.88
HERC4-213ENST00000506515 PLTPP55058 493 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 DNAJB13P59910 316 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 SLC35A2P78381 396 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 ZNF181Q2M3W8 571 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 C6orf99Q4VX62 202 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 ATP6AP1LQ52LC2 224 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 TMEM236Q5W0B7 351 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 CCNYL1Q8N7R7 359 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 OR11L1Q8NGX0 322 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 BAALCQ8WXS3 180 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 CIDECQ96AQ7 238 aaPredicted RBP3.28□□□□□ -1.88
HERC4-213ENST00000506515 RDH12Q96NR8 316 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 CHCHD7Q9BUK0 85 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 EMC6Q9BV81 110 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 SLC22A4Q9H015 551 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 GLTPQ9NZD2 209 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 VPREB3Q9UKI3 123 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 LRRC42Q9Y546 428 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 TIMM22Q9Y584 194 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 U3KQK5 164 aa3.28□□□□□ -1.88
HERC4-213ENST00000506515 TRAV36DV7A0A075B6V5 113 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 A0A0B4J2E0 115 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 EXOC1LA0A1B0GW35 172 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 LGALS9O00182 355 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 AZIN1O14977 448 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 POLR3GO15318 223 aaPredicted RBP3.27□□□□□ -1.89
HERC4-213ENST00000506515 CDRT1O95170 752 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 IGHV1-69P01742 117 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 CCNOP22674 350 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 PRKACBP22694 351 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 SLC6A1P30531 599 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 MAGEA12P43365 314 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 MAD2L1BPQ15013 274 aaPredicted RBP3.27□□□□□ -1.89
HERC4-213ENST00000506515 LIN52Q52LA3 116 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 DNLZQ5SXM8 178 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 LRP11Q86VZ4 500 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 OR8J2Q8NGG1 315 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 OR1L1Q8NH94 360 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 KLF14Q8TD94 323 aaPredicted RBP3.27□□□□□ -1.89
HERC4-213ENST00000506515 SLC25A44Q96H78 314 aaPredicted RBP3.27□□□□□ -1.89
HERC4-213ENST00000506515 SLC35G5Q96KT7 338 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 CCDC115Q96NT0 180 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 RBP7Q96R05 134 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 MARVELD1Q9BSK0 173 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 OR51B2Q9Y5P1 312 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 KPTNQ9Y664 436 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 COL7A1Q02388 2944 aa3.27□□□□□ -1.89
HERC4-213ENST00000506515 A0A087WUJ7 227 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 TRAV38-1A0A0B4J264 116 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 CEACAM18A8MTB9 384 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 A8MUU9 505 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 PIAS1O75925 651 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 COX5BP10606 129 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 RGS6P49758 472 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 RPL38P63173 70 aaKnown RBP3.26□□□□□ -1.89
HERC4-213ENST00000506515 HBA1P69905 142 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 NDUFAF6Q330K2 333 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 KDM4DQ6B0I6 523 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 OR2W3Q7Z3T1 314 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 COMTD1Q86VU5 262 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 LRRC34Q8IZ02 419 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 ZNF101Q8IZC7 436 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 OR5D16Q8NGK9 328 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 ENKURQ8TC29 256 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 FAM19A4Q96LR4 140 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 ZNF75AQ96N20 296 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 OR51I1Q9H343 314 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 TMEM100Q9NV29 134 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 TMEM38BQ9NVV0 291 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 MARCOQ9UEW3 520 aaPredicted RBP3.26□□□□□ -1.89
HERC4-213ENST00000506515 SIGLEC7Q9Y286 467 aa3.26□□□□□ -1.89
HERC4-213ENST00000506515 IGHV1-3A0A0C4DH29 117 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 A0A1W2PRF3 423 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 A0A1W2PRG6 482 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 A0A1W2PRM7 423 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 C5orf49A4QMS7 147 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 PRORSD1PA6NEY8 169 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 LINC01619G3V211 115 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 ZNF701M0R085 212 aaPredicted RBP3.25□□□□□ -1.89
HERC4-213ENST00000506515 GCGP01275 180 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 GRPRP30550 384 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 CMC4P56277 68 aaPredicted RBP3.25□□□□□ -1.89
HERC4-213ENST00000506515 FGF12P61328 243 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 NCALDP61601 193 aa3.25□□□□□ -1.89
HERC4-213ENST00000506515 RPL18AQ02543 176 aaKnown RBP3.25□□□□□ -1.89
HERC4-213ENST00000506515 EMX2Q04743 252 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms