RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 ATP5G2Q06055 141 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 DCTN2Q13561 401 aaKnown RBP11.94□□□□□ -0.5
MED28-204ENST00000506409 RNASE10Q5GAN6 216 aaKnown RBP11.94□□□□□ -0.5
MED28-204ENST00000506409 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 NECAP1Q8NC96 275 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 PRR25Q96S07 402 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 RSRP1Q9BUV0 290 aa11.94□□□□□ -0.5
MED28-204ENST00000506409 TRAV3A0A0B4J244 114 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 MARCH11A6NNE9 402 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 H3BMQ9 156 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 OR2J3O76001 311 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 DHFRP00374 187 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 TRBV12-3P01733 135 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 CD3DP04234 171 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 AREGP15514 252 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 TBPP20226 339 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 LPAR6P43657 344 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 UCP3P55916 312 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 OR2B8PP59922 312 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 EXOSC2Q13868 293 aaKnown RBP11.93□□□□□ -0.5
MED28-204ENST00000506409 C19orf35Q6ZS72 473 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 ARRDC1Q8N5I2 433 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 ISOC1Q96CN7 298 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 COMMD5Q9GZQ3 224 aa11.93□□□□□ -0.5
MED28-204ENST00000506409 ZNF256Q9Y2P7 627 aaPredicted RBP11.93□□□□□ -0.5
MED28-204ENST00000506409 GABARAPH6UMI1 98 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 LY86O95711 162 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 KRASP01116 189 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 CRYGCP07315 174 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 FGF2P09038 288 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 PSMB6P28072 239 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 MRPS10P82664 201 aaKnown RBP11.92□□□□□ -0.5
MED28-204ENST00000506409 C15orf32Q32M92 178 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 ZNF585BQ52M93 769 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 TBC1D26Q86UD7 250 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 DIRAS2Q96HU8 199 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 ELOVL1Q9BW60 279 aa11.92□□□□□ -0.5
MED28-204ENST00000506409 C6orf62Q9GZU0 229 aaPredicted RBP11.92□□□□□ -0.5
MED28-204ENST00000506409 CGB1A6NKQ9 187 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 REG1AP05451 166 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 DEFA4P12838 97 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 PGAM2P15259 253 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 CTRB1P17538 263 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 G6PCP35575 357 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 SYNJ2BPP57105 145 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 TAS2R19P59542 299 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 KLF5Q13887 457 aaPredicted RBP11.91□□□□□ -0.5
MED28-204ENST00000506409 RPEL1Q2QD12 228 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 CTRB2Q6GPI1 263 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 LHFPL1Q86WI0 220 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 TMEM229BQ8NBD8 167 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 OR4D10Q8NGI6 311 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 OR6Q1Q8NGQ2 317 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 QTRT1Q9BXR0 403 aaKnown RBP11.91□□□□□ -0.5
MED28-204ENST00000506409 FBXL7Q9UJT9 491 aa11.91□□□□□ -0.5
MED28-204ENST00000506409 RAB3DO95716 219 aa11.9□□□□□ -0.5
MED28-204ENST00000506409 CD74P04233 296 aa11.9□□□□□ -0.5
MED28-204ENST00000506409 SSBP1Q04837 148 aaKnown RBP11.9□□□□□ -0.5
MED28-204ENST00000506409 IL18Q14116 193 aa11.9□□□□□ -0.5
MED28-204ENST00000506409 TATDN3Q17R31 274 aa11.9□□□□□ -0.5
MED28-204ENST00000506409 FAM209BQ5JX69 171 aa11.9□□□□□ -0.5
MED28-204ENST00000506409 OR9G4Q8NGQ1 327 aa11.9□□□□□ -0.5
MED28-204ENST00000506409 SMIM4Q8WVI0 70 aa11.9□□□□□ -0.5
MED28-204ENST00000506409 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.5
MED28-204ENST00000506409 SRSF8Q9BRL6 282 aaKnown RBP11.9□□□□□ -0.5
MED28-204ENST00000506409 SLIRPQ9GZT3 109 aaKnown RBP11.9□□□□□ -0.5
MED28-204ENST00000506409 FAM212BQ9NTI7 297 aaPredicted RBP11.9□□□□□ -0.5
MED28-204ENST00000506409 RABL2AQ9UBK7 228 aaPredicted RBP11.9□□□□□ -0.5
MED28-204ENST00000506409 RABL2BQ9UNT1 228 aa11.9□□□□□ -0.5
MED28-204ENST00000506409 SORL1Q92673 2214 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.89□□□□□ -0.51
MED28-204ENST00000506409 IGLC7A0M8Q6 106 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 BMPR1BO00238 502 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 SNAPC5O75971 98 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 HIST1H1BP16401 226 aaKnown RBP11.89□□□□□ -0.51
MED28-204ENST00000506409 PI3P19957 117 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 PPP5CP53041 499 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 CD69Q07108 199 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 SCGB2B2Q4G0G5 96 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 THOC7Q6I9Y2 204 aaKnown RBP11.89□□□□□ -0.51
MED28-204ENST00000506409 STEAP1BQ6NZ63 245 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 CADM3Q8N126 398 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 OR1L8Q8NGR8 309 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 ZNF486Q96H40 463 aaPredicted RBP11.89□□□□□ -0.51
MED28-204ENST00000506409 NSG2Q9Y328 171 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 LSM4Q9Y4Z0 139 aaKnown RBP11.89□□□□□ -0.51
MED28-204ENST00000506409 CEPT1Q9Y6K0 416 aa11.89□□□□□ -0.51
MED28-204ENST00000506409 IGLV11-55A0A075B6I3 123 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 TEX50A0A1B0GTY4 177 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 CCDC160A6NGH7 325 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 CTDSPLO15194 276 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 NDUFB8O95169 186 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 SERPINE2P07093 398 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 TRAPPC2P0DI81 140 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 TRAPPC2BP0DI82 140 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 SPNP16150 400 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 PIGPP57054 158 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 RND3P61587 244 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 HAPLN4Q86UW8 402 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms