RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 UPK2O00526 184 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 B3GALNT1O75752 331 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 DHFRP00374 187 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 SERPINE2P07093 398 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 ZNF735P0CB33 412 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 APELAP0DMC3 54 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 IGLL1P15814 213 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 RPA2P15927 270 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 BEAN1Q3B7T3 259 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 KPRPQ5T749 579 aaPredicted RBP12.95□□□□□ -0.34
SNCA-209ENST00000506244 CCDC190Q86UF4 302 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 C1QL4Q86Z23 238 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 Q8N402 240 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 OR1N2Q8NGR9 330 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 OR13C8Q8NGS7 320 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 USMG5Q96IX5 58 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 DUX3Q96PT4 197 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 FYTTD1Q96QD9 318 aaKnown RBP12.95□□□□□ -0.34
SNCA-209ENST00000506244 OR5B12Q96R08 314 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 SRSF8Q9BRL6 282 aaKnown RBP12.95□□□□□ -0.34
SNCA-209ENST00000506244 THAP7Q9BT49 309 aaPredicted RBP12.95□□□□□ -0.34
SNCA-209ENST00000506244 SLC2A8Q9NY64 477 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 SCP2D1Q9UJQ7 156 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 NOTCH1P46531 2555 aa12.95□□□□□ -0.34
SNCA-209ENST00000506244 FAM223BA6NKX1 122 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 NPIPB5A8MRT5 1133 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 TEX22C9J3V5 150 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 SNAPC5O75971 98 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 ATG12O94817 140 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 KRASP01116 189 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 CTSDP07339 412 aaPredicted RBP12.94□□□□□ -0.34
SNCA-209ENST00000506244 DEFA6Q01524 100 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 ZNF585BQ52M93 769 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 OXLD1Q5BKU9 147 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 FAAP20Q6NZ36 180 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 FAM223AQ8IWN6 122 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 TTC9CQ8N5M4 171 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 DEDD2Q8WXF8 326 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 NOTCH3Q9UM47 2321 aa12.94□□□□□ -0.34
SNCA-209ENST00000506244 LINC01619G3V211 115 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 PI3P19957 117 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 ETV6P41212 452 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 HSD17B13Q7Z5P4 300 aaPredicted RBP12.93□□□□□ -0.34
SNCA-209ENST00000506244 TOMM5Q8N4H5 51 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 MARCH1Q8TCQ1 289 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 SCGB3A2Q96PL1 93 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 QTRT1Q9BXR0 403 aaKnown RBP12.93□□□□□ -0.34
SNCA-209ENST00000506244 MCUBQ9NWR8 336 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 FKBP11Q9NYL4 201 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 PRNDQ9UKY0 176 aa12.93□□□□□ -0.34
SNCA-209ENST00000506244 C3orf85A0A1B0GTC6 90 aa12.92□□□□□ -0.34
SNCA-209ENST00000506244 HSPB1P04792 205 aaKnown RBP12.92□□□□□ -0.34
SNCA-209ENST00000506244 IL6RP08887 468 aaPredicted RBP12.92□□□□□ -0.34
SNCA-209ENST00000506244 G6PCP35575 357 aa12.92□□□□□ -0.34
SNCA-209ENST00000506244 OR2B8PP59922 312 aa12.92□□□□□ -0.34
SNCA-209ENST00000506244 FAM209BQ5JX69 171 aa12.92□□□□□ -0.34
SNCA-209ENST00000506244 REC114Q7Z4M0 266 aa12.92□□□□□ -0.34
SNCA-209ENST00000506244 OR51S1Q8NGJ8 323 aa12.92□□□□□ -0.34
SNCA-209ENST00000506244 TRIM63Q969Q1 353 aa12.92□□□□□ -0.34
SNCA-209ENST00000506244 ZMAT5Q9UDW3 170 aaKnown RBP12.92□□□□□ -0.34
SNCA-209ENST00000506244 MEGF8Q7Z7M0 2845 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 HMX3A6NHT5 357 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 CYB5BO43169 146 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 RHOGP84095 191 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 ZNF79Q15937 498 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 H2BFWTQ7Z2G1 175 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 NECAP1Q8NC96 275 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 OR6Q1Q8NGQ2 317 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 OR1L8Q8NGR8 309 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 OR5B3Q8NH48 314 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 MRGPRFQ96AM1 343 aa12.91□□□□□ -0.34
SNCA-209ENST00000506244 ALX4Q9H161 411 aaPredicted RBP12.91□□□□□ -0.34
SNCA-209ENST00000506244 RANGRFQ9HD47 186 aaPredicted RBP12.91□□□□□ -0.34
SNCA-209ENST00000506244 TRBV9A0A0B4J1U6 114 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 TRAV3A0A0B4J244 114 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 C15orf61A6NNL5 157 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 CRYGCP07315 174 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 DEFA4P12838 97 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 HIST1H1BP16401 226 aaKnown RBP12.9□□□□□ -0.34
SNCA-209ENST00000506244 ZP3P21754 424 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 PSMB6P28072 239 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 INPP1P49441 399 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 AKR1C2P52895 323 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 KLF9Q13886 244 aaPredicted RBP12.9□□□□□ -0.34
SNCA-209ENST00000506244 TRIM16LQ309B1 348 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 C9orf66Q5T8R8 295 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 SEC22AQ96IW7 307 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 TP53RKQ96S44 253 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 OR51B2Q9Y5P1 312 aa12.9□□□□□ -0.34
SNCA-209ENST00000506244 IGHV4OR15-8A0A075B7B6 117 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 A0A087WW49 117 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 TEX13DA0A0J9YY54 714 aaPredicted RBP12.89□□□□□ -0.35
SNCA-209ENST00000506244 TRAPPC2P0DI81 140 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 TRAPPC2BP0DI82 140 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 AREGP15514 252 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 CTRB1P17538 263 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 ATP5G2Q06055 141 aa12.89□□□□□ -0.35
SNCA-209ENST00000506244 EXOSC2Q13868 293 aaKnown RBP12.89□□□□□ -0.35
SNCA-209ENST00000506244 FOXB2Q5VYV0 432 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms