RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 GINS4Q9BRT9 223 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 TM2D1Q9BX74 207 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 KCNK15Q9H427 330 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 FBXL15Q9H469 300 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 TAF9BQ9HBM6 251 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 OR2S2Q9NQN1 319 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 SLC2A9Q9NRM0 540 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 GFOD1Q9NXC2 390 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 PIPOXQ9P0Z9 390 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 DAPK2Q9UIK4 370 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 AK6Q9Y3D8 172 aaKnown RBP2.29□□□□□ -2.04
TCOF1-208ENST00000506063 LRRC42Q9Y546 428 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 RBM7Q9Y580 266 aaKnown RBP2.29□□□□□ -2.04
TCOF1-208ENST00000506063 ETV7Q9Y603 341 aa2.29□□□□□ -2.04
TCOF1-208ENST00000506063 SAA2-SAA4A0A096LPE2 208 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TRBV9A0A0B4J1U6 114 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TRAV39A0A0B4J263 110 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TMEM272A0A1B0GTI8 110 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 SMIM30A4D0T7 59 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 OR5H14A6NHG9 310 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 IFITM5A6NNB3 132 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TMEM14DPA8MWL7 114 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 C15orf65H3BRN8 121 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 H7C2Y5 167 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 RRHO14718 337 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 RAB29O14966 203 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 FABP7O15540 132 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 LANCL1O43813 399 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TMEM127O75204 238 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 SC5DO75845 299 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 SPDEFO95238 335 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 OR2C1O95371 312 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 DIRAS3O95661 229 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 C1QBP02746 253 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 FCGR3AP08637 254 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 SAA2P0DJI9 122 aaPredicted RBP2.28□□□□□ -2.04
TCOF1-208ENST00000506063 HIST1H1DP16402 221 aaKnown RBP2.28□□□□□ -2.04
TCOF1-208ENST00000506063 CD36P16671 472 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 RAB6AP20340 208 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 ZBTB25P24278 435 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 S100GP29377 79 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 FGF9P31371 208 aaPredicted RBP2.28□□□□□ -2.04
TCOF1-208ENST00000506063 PPP1CCP36873 323 aaKnown RBP2.28□□□□□ -2.04
TCOF1-208ENST00000506063 CLDN12P56749 244 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 OR10A3P58181 314 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 ARPC4P59998 168 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 HTD2P86397 168 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 MXD1Q05195 221 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 UNC119Q13432 240 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 HMGN3Q15651 99 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 SSX1Q16384 188 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 RTL8BQ17RB0 113 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 CT45A1Q5HYN5 189 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 UBE2NLQ5JXB2 153 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 OR10K2Q6IF99 312 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 UNQ9165/PRO28630Q6UXU0 137 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF562Q6V9R5 426 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 C6orf201Q7Z4U5 140 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TPRA1Q86W33 373 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 GPHB5Q86YW7 130 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 ODF3L1Q8IXM7 274 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 SPARTQ8N0X7 666 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF114Q8NC26 417 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TSPAN14Q8NG11 270 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 OR4A4PQ8NGN8 299 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 OR1L1Q8NH94 360 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 OR10J5Q8NHC4 309 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 CT45A3Q8NHU0 189 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 MRPL30Q8TCC3 161 aaKnown RBP2.28□□□□□ -2.04
TCOF1-208ENST00000506063 PTX4Q96A99 478 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 ARHGAP5-AS1Q96IT6 56 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 USMG5Q96IX5 58 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 SULT4A1Q9BR01 284 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 ZNF251Q9BRH9 671 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 MRPL20Q9BYC9 149 aaKnown RBP2.28□□□□□ -2.04
TCOF1-208ENST00000506063 MRPS26Q9BYN8 205 aaKnown RBP2.28□□□□□ -2.04
TCOF1-208ENST00000506063 LPAR5Q9H1C0 372 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 ATG5Q9H1Y0 275 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 OR2D2Q9H210 308 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 C5orf66Q9H5L9 145 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 Q9H8V8 135 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 IFT46Q9NQC8 304 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TXNL4BQ9NX01 149 aaKnown RBP2.28□□□□□ -2.04
TCOF1-208ENST00000506063 RHBDL2Q9NX52 303 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 AK3Q9UIJ7 227 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 RAB22AQ9UL26 194 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 RNF150Q9ULK6 438 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 HSF4Q9ULV5 492 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 MRPS7Q9Y2R9 242 aaKnown RBP2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TMED3Q9Y3Q3 217 aa2.28□□□□□ -2.04
TCOF1-208ENST00000506063 TRBV6-6A0A0A6YYG2 114 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 A0A0A6YYH2 397 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 TMEM235A6NFC5 223 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 A6NJ64 397 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 MFNGO00587 321 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 BET1O15155 118 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 ST8SIA5O15466 376 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 RS1O15537 224 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 YPEL1O60688 119 aa2.27□□□□□ -2.05
TCOF1-208ENST00000506063 RBBP9O75884 186 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms