RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ZNF818PQ6ZRF7 136 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 SH2D6Q7Z4S9 175 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF695Q8IW36 515 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 FAM219AQ8IW50 185 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 C9orf62Q8N4C0 152 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 TMEM116Q8NCL8 245 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 DEFB108BQ8NET1 73 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 OR8U1Q8NH10 309 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 C8orf46Q8TAG6 207 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 PPP1R1CQ8WVI7 109 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 RBPMSQ93062 196 aaKnown RBP3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 LSM10Q969L4 123 aaKnown RBP3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 ADTRPQ96IZ2 230 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 CCL13Q99616 98 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 TMEM246Q9BRR3 403 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 CHIAQ9BZP6 476 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 OR2S2Q9NQN1 319 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 CCL28Q9NRJ3 127 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 IDI2-AS1Q9NZ38 188 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 GNG12Q9UBI6 72 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 CACFD1Q9UGQ2 172 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 RPUSD1Q9UJJ7 312 aaKnown RBP3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 HSPB11Q9Y547 144 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 KALRNO60229 2985 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 MALRD1Q5VYJ5 2156 aa3.89□□□□□ -1.79
DEPDC1B-203ENST00000505017 SPTAN1Q13813 2472 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 ARID1AO14497 2285 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 CFAP46Q8IYW2 2715 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZFYVE26Q68DK2 2539 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 TRAV39A0A0B4J263 110 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 C13orf42A0A1B0GVH6 325 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 hCG_1809904A0A1W2PP81 198 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 A0A1W2PPE2 198 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 A0A1W2PR64 198 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 A0A1W2PRV1 198 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 FAM25EA8MYX2 175 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 L7N2F9 121 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 HSD17B6O14756 317 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 SIX6O95475 246 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 MPC2O95563 127 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 RLN2P04090 185 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 SERPINE2P07093 398 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 SOD3P08294 240 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 MMP9P14780 707 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 SSTR5P35346 364 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 PPP1CCP36873 323 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 NUP62P37198 522 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 EFNA4P52798 201 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 NKX2-5P52952 324 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 RPL31P62899 125 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 EIF4EBP1Q13541 118 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 SMCO1Q147U7 214 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 IAH1Q2TAA2 248 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 MORN2Q502X0 79 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 NMSQ5H8A3 153 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 THOC7Q6I9Y2 204 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 LAMTOR1Q6IAA8 161 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 FAM71F2Q6NXP2 309 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 PRSS54Q6PEW0 395 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 ACOT7LQ6ZUV0 252 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF767PQ75MW2 155 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF546Q86UE3 836 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 SELENOHQ8IZQ5 122 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZCCHC24Q8N2G6 241 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 LINC00311Q8N616 119 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 DRAM1Q8N682 238 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 FAM216BQ8N7L0 139 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 TPRX1Q8N7U7 411 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 INO80EQ8NBZ0 244 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 OR11H4Q8NGC9 324 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 OR8B3Q8NGG8 313 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 GRPEL2Q8TAA5 225 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF596Q8TC21 504 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 TNFRSF14Q92956 283 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF714Q96N38 554 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 OR8B2Q96RD0 313 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 TP53RKQ96S44 253 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 AGMATQ9BSE5 352 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 MCRIP2Q9BUT9 160 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 OR2D2Q9H210 308 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 DCAF16Q9NXF7 216 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 COA4Q9NYJ1 87 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 PAIP2BQ9ULR5 123 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 TNFSF18Q9UNG2 199 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 YLPM1P49750 1951 aaKnown RBP3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 MYO18BQ8IUG5 2567 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 NBEAQ8NFP9 2946 aa3.88□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF462Q96JM2 2506 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 FXYD6-FXYD2A0A087WZ82 144 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 A0A087X0M5 115 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 TRAV14DV4A0A0A6YYC5 116 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 A0A1B0GX30 115 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 E5RGE8 158 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 F5H0A9 414 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 SMLR1H3BR10 107 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 C19orf84I3L1E1 186 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 CCSO14618 274 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 RAB29O14966 203 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 ST8SIA3O43173 380 aa3.87□□□□□ -1.79
DEPDC1B-203ENST00000505017 ADAP1O75689 374 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms