RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 CRYGBP07316 175 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 OR8U8P0C7N1 319 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 RAB9AP51151 201 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 BRWD1-AS2P59051 145 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 DEFA1P59665 94 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 DEFA3P59666 94 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 UBE2MP61081 183 aaKnown RBP9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 ECSCRQ19T08 205 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 TMEM128Q5BJH2 165 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 FAAP20Q6NZ36 180 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 MMD2Q8IY49 270 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 OR5B12Q96R08 314 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 TSC22D3Q99576 134 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 B9D2Q9BPU9 175 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 FBXL15Q9H469 300 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 C5orf66Q9H5L9 145 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 FKBP11Q9NYL4 201 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 BET1LQ9NYM9 111 aa9.66□□□□□ -0.86
PDGFRA-204ENST00000504461 A0A1W2PN81 502 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 LYRM1O43325 122 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 NDUFB6O95139 128 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 CHRNA7P36544 502 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 LPAR6P43657 344 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 CX3CL1P78423 397 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 SRPXP78539 464 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 ZNF616Q08AN1 781 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 PRSS8Q16651 343 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 AKIRIN2Q53H80 203 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 C11orf87Q6NUJ2 197 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 DMBX1Q8NFW5 382 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 MYOZ3Q8TDC0 251 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 MRGPRFQ96AM1 343 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 GALNT14Q96FL9 552 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 NAA60Q9H7X0 242 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 GNB4Q9HAV0 340 aa9.65□□□□□ -0.86
PDGFRA-204ENST00000504461 CRYM-AS1A6NIL9 109 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 I3L521 148 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 PLA2G10O15496 165 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 SNAPC5O75971 98 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 CDS2O95674 445 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 PI3P19957 117 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 RUNX1Q01196 453 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 ASAH1Q13510 395 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 FHL3Q13643 280 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 KIAA0141Q14154 515 aaPredicted RBP9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 FXYD3Q14802 87 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 ZNF585BQ52M93 769 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 OR2B11Q5JQS5 317 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 PUSL1Q8N0Z8 303 aaKnown RBP9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 MINDY2Q8NBR6 621 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 TMEM167AQ8TBQ9 72 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 PRR25Q96S07 402 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 CLCC1Q96S66 551 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 GPHA2Q96T91 129 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 TMEM222Q9H0R3 208 aa9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 ALX4Q9H161 411 aaPredicted RBP9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 FOXA2Q9Y261 457 aaPredicted RBP9.64□□□□□ -0.87
PDGFRA-204ENST00000504461 DNAH3Q8TD57 4116 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 LINC00854A0A1B0GVQ3 168 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 MARCH11A6NNE9 402 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 FCN1O00602 326 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 KBTBD11O94819 623 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 KRASP01116 189 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 IL6RP08887 468 aaPredicted RBP9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 SAA1P0DJI8 122 aaPredicted RBP9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 AKR1C4P17516 323 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 UCP1P25874 307 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 INSL3P51460 131 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 CRIP2P52943 208 aaPredicted RBP9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 GNB1P62873 340 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 RPL8P62917 257 aaKnown RBP9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 UNQ5815/PRO19632Q6UWF5 114 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 H2BFWTQ7Z2G1 175 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 SLC25A42Q86VD7 318 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 FAM219AQ8IW50 185 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 CENPSQ8N2Z9 138 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 IL22RA2Q969J5 263 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 RRNAD1Q96FB5 475 aaKnown RBP9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 TMEM56Q96MV1 263 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 SPIN2AQ99865 258 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 SPIN2BQ9BPZ2 258 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 SRSF8Q9BRL6 282 aaKnown RBP9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 NUBP2Q9Y5Y2 271 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 TMEM56-RWDD3S4R434 201 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 COL7A1Q02388 2944 aa9.63□□□□□ -0.87
PDGFRA-204ENST00000504461 FAM240BA0A1B0GVZ2 78 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 OVOL1O14753 267 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 LY86O95711 162 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 NHLRC4P0CG21 123 aaPredicted RBP9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 NDPQ00604 133 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 TRIM16LQ309B1 348 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 THOC7Q6I9Y2 204 aaKnown RBP9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 OR4A47Q6IF82 309 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 HSD17B13Q7Z5P4 300 aaPredicted RBP9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 CASTOR1Q8WTX7 329 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 GLYATL2Q8WU03 294 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 DCUN1D4Q92564 292 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 ARPC1AQ92747 370 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 COMMD5Q9GZQ3 224 aa9.62□□□□□ -0.87
PDGFRA-204ENST00000504461 PRNDQ9UKY0 176 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms