RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 A0A0A6YYD5 115 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 TRBV9A0A0B4J1U6 114 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 TRAV1-1A0A0B4J248 108 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 LOC102723971A0A1B0GUV8 181 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 TSPAN11A1L157 253 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A8PA6NJQ4 464 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 TEX22C9J3V5 150 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A26D6RGX4 464 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 NPIPB6E9PJ23 425 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 M0R129 80 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 NUPR1O60356 82 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A13PP0C7W8 464 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A24PP0C7X0 464 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 MDKP21741 143 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-203ENST00000502998 VDAC1P21796 283 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 AADACP22760 399 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 GPR183P32249 361 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 RBMXP38159 391 aaKnown RBP5.46□□□□□ -1.54
CLCN3-203ENST00000502998 NKX2-1P43699 371 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-203ENST00000502998 RPL31P62899 125 aaKnown RBP5.46□□□□□ -1.54
CLCN3-203ENST00000502998 ZNF85Q03923 595 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 FMODQ06828 376 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 CD226Q15762 336 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 LY6G5CQ5SRR4 150 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 C1orf220Q5T0J3 134 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 C1orf195Q5TG92 126 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 STPG1Q5TH74 334 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A2PQ658T7 463 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 SP5Q6BEB4 398 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-203ENST00000502998 TMEM64Q6YI46 380 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 CYP2G1PQ6ZSU1 146 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 Q6ZT83 130 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 STHQ8IWL8 128 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 MSRB3Q8IXL7 192 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 TMEM86BQ8N661 226 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 ZFP62Q8NB50 900 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-203ENST00000502998 ZNF740Q8NDX6 193 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 OR10J6PQ8NGY7 276 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 OR1F12Q8NHA8 337 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 RTN4IP1Q8WWV3 396 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-203ENST00000502998 OVCA2Q8WZ82 227 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 DDB2Q92466 427 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 LINC01587Q99440 93 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 SFXN3Q9BWM7 321 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 PLEKHF2Q9H8W4 249 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 SLC25A37Q9NYZ2 338 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 CISD1Q9NZ45 108 aaKnown RBP5.46□□□□□ -1.54
CLCN3-203ENST00000502998 TAAR3PQ9P1P4 343 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 TP53TG1Q9Y2A0 90 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 RAXQ9Y2V3 346 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 CABIN1Q9Y6J0 2220 aa5.46□□□□□ -1.54
CLCN3-203ENST00000502998 TENM4Q6N022 2769 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 ANKRD12Q6UB98 2062 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 NINQ8N4C6 2090 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 LOC102725191A0A1B0GVB3 256 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A7PA6NKC0 464 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 C2CD4BA6NLJ0 364 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A27PA6NNH2 459 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 METTL12A8MUP2 240 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A22PA8MWA6 464 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A12PA8MX19 464 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 FAM90A23PA8MXZ1 464 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 EEF1E1-BLOC1S5C9J1V9 151 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 H0YIZ8 118 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 IFNL4K9M1U5 179 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 GPR137BO60478 399 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 SERF1AO75920 110 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 ATP5LO75964 103 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 CLDN7O95471 211 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 CXorf1O96002 111 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 CA2P00918 260 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 C3orf79P0CE67 100 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 IGLL1P15814 213 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 CR2P20023 1033 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 FCGR2CP31995 323 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 TMEM50BP56557 158 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 SMIM11AP58511 58 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 MRPS21P82921 87 aaKnown RBP5.45□□□□□ -1.54
CLCN3-203ENST00000502998 ATP5G2Q06055 141 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 HES1Q14469 280 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 C4orf26Q17RF5 130 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 HLA-DQA1Q5Y7H0 255 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 PMS2CLQ68D20 193 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 TMEM200BQ69YZ2 307 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 BAGE3Q86Y29 109 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 BAGE2Q86Y30 109 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 TMEFF1Q8IYR6 380 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 SLC22A18ASQ8N1D0 253 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 SGMS2Q8NHU3 365 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 OSR1Q8TAX0 266 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-203ENST00000502998 RDH5Q92781 318 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 FGF11Q92914 225 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 MRPL24Q96A35 216 aaKnown RBP5.45□□□□□ -1.54
CLCN3-203ENST00000502998 ATXN7L3BQ96GX2 97 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 C2orf50Q96LR7 162 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 ZNF488Q96MN9 340 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 RARRES2Q99969 163 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 CHST6Q9GZX3 395 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms