RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 SMAD4Q13485 552 aaKnown RBP9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 ISXQ2M1V0 245 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A10PA6NDY2 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A18PA6NE21 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A16PA6NEW6 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A20PA6NIJ5 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A8PA6NJQ4 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A7PA6NKC0 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A22PA8MWA6 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A12PA8MX19 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A5PA8MXJ8 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A23PA8MXZ1 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A15PP0C7V4 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A13PP0C7W8 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A14PP0C7W9 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 FAM90A24PP0C7X0 464 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 SPNP16150 400 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 ASB10Q8WXI3 467 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 CACNG8Q8WXS5 425 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 JMJD8Q96S16 334 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 AHDC1Q5TGY3 1603 aaPredicted RBP9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 AGFG2O95081 481 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 MARVELD3Q96A59 401 aa9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 EAF1Q96JC9 268 aaPredicted RBP9.65□□□□□ -0.86
AC055713.1-201ENST00000498967 A0A1W2PRD5 423 aa9.65□□□□□ -0.87
AC055713.1-201ENST00000498967 A0A1W2PRF3 423 aa9.65□□□□□ -0.87
AC055713.1-201ENST00000498967 A0A1W2PRM7 423 aa9.65□□□□□ -0.87
AC055713.1-201ENST00000498967 TRACP01848 142 aa9.65□□□□□ -0.87
AC055713.1-201ENST00000498967 DRAM1Q8N682 238 aa9.65□□□□□ -0.87
AC055713.1-201ENST00000498967 LINC00518Q8N0U6 118 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 UPK2O00526 184 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 GFRA3O60609 400 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 ZNF576Q9H609 170 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 FNDC4Q9H6D8 234 aaPredicted RBP9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 F2Z2F3 143 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 FOXH1O75593 365 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 PTGDSP41222 190 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 SOX8P57073 446 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 SPRED2Q7Z698 418 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 GTSCR1Q86UQ5 136 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 C1orf162Q8NEQ5 155 aaPredicted RBP9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 CD160O95971 181 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 MPV17P39210 176 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 SLC25A37Q9NYZ2 338 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 ECM29Q5VYK3 1845 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 TRAV5A0A0B4J249 113 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 TRAV41A0A0B4J266 112 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 MARCH11A6NNE9 402 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 MRPL24Q96A35 216 aaKnown RBP9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 PLEKHB2Q96CS7 222 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 WDR54Q9H977 334 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 A0A0U1RQS6 177 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 ADARB2-AS1A8MUL3 147 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 RND2P52198 227 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 TMEM186Q96B77 213 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 LINC01587Q99440 93 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 WNT10AQ9GZT5 417 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 HILPDAQ9Y5L2 63 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 NWD2Q9ULI1 1742 aa9.64□□□□□ -0.87
AC055713.1-201ENST00000498967 CRYBB3P26998 211 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 FER1L6-AS1Q8NA97 138 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 SNHG12Q9BXW3 62 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 TMEM229AB2RXF0 380 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 MAJINQ3KP22 176 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 GPR146Q96CH1 333 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 A0A1W2PRS3 328 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 TMEM202A6NGA9 273 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 TGFAP01135 160 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 R4GN57 208 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 CBLN1P23435 193 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 TSPAN7P41732 249 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 TNFRSF9Q07011 255 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 DMRTC1Q5HYR2 192 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 TMEM54Q969K7 222 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 IL36BQ9NZH7 164 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 RGPD2P0DJD1 1756 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 HAX1O00165 279 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 HOXB1P14653 301 aaPredicted RBP9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 CXCL3P19876 107 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 FOXC1Q12948 553 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 FBXW9Q5XUX1 488 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 C5P01031 1676 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 PSCAO43653 123 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 MAVSQ7Z434 540 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 NABP2Q9BQ15 211 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 RPP21Q9H633 154 aaKnown RBP9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 PNKDQ8N490 385 aa9.63□□□□□ -0.87
AC055713.1-201ENST00000498967 SOCS3O14543 225 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 ZP1P60852 638 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 HCP5Q6MZN7 132 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 PRADC1Q9BSG0 188 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 FXYD3Q14802 87 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 CHTOPQ9Y3Y2 248 aaKnown RBP9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 IGHV3-21A0A0B4J1V1 117 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 UBE2DNLQ8IWF7 75 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 TCRBV5S2A0A599 114 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 GRIFINA4D1Z8 144 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 IGF2P01344 180 aa9.62□□□□□ -0.87
AC055713.1-201ENST00000498967 NBEAP1P0C6P0 100 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms