RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 PTTG1O95997 202 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 IL6RP08887 468 aaPredicted RBP9.37□□□□□ -0.91
CUX1-210ENST00000497815 EGR2P11161 476 aaPredicted RBP9.37□□□□□ -0.91
CUX1-210ENST00000497815 VDAC1P21796 283 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 COMPP49747 757 aaPredicted RBP9.37□□□□□ -0.91
CUX1-210ENST00000497815 PROK1P58294 105 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 C10orf99Q6UWK7 81 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 ZNF329Q86UD4 541 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 STPG2Q8N412 459 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 C11orf44Q8N8P7 122 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 OR4A16Q8NH70 328 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 COQ8AQ8NI60 647 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 SRSF12Q8WXF0 261 aaKnown RBP9.37□□□□□ -0.91
CUX1-210ENST00000497815 IL22RA2Q969J5 263 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 HINT2Q9BX68 163 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 COMMD5Q9GZQ3 224 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 ALX4Q9H161 411 aaPredicted RBP9.37□□□□□ -0.91
CUX1-210ENST00000497815 MMP24Q9Y5R2 645 aa9.37□□□□□ -0.91
CUX1-210ENST00000497815 PSMB11A5LHX3 300 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 DBX1A6NMT0 343 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 DUS4LO95620 317 aaKnown RBP9.36□□□□□ -0.91
CUX1-210ENST00000497815 IGF1P05019 195 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 HOXB5P09067 269 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 MAS1LP35410 378 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 RPL27AP46776 148 aaKnown RBP9.36□□□□□ -0.91
CUX1-210ENST00000497815 MECP2P51608 486 aaKnown RBP9.36□□□□□ -0.91
CUX1-210ENST00000497815 RGS21Q2M5E4 152 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 HIST2H2BDQ6DRA6 164 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 UNQ5815/PRO19632Q6UWF5 114 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 C12orf54Q6X4T0 127 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 UXS1Q8NBZ7 420 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 LFNGQ8NES3 379 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 CHPT1Q8WUD6 406 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 GPR146Q96CH1 333 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 WNT10AQ9GZT5 417 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 PRNDQ9UKY0 176 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 OR51B2Q9Y5P1 312 aa9.36□□□□□ -0.91
CUX1-210ENST00000497815 FBN1P35555 2871 aaKnown RBP9.36□□□□□ -0.91
CUX1-210ENST00000497815 A0A0B4J293 547 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 A0A0B4J2A0 478 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 TEX50A0A1B0GTY4 177 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 HMX3A6NHT5 357 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 C15orf61A6NNL5 157 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 E7EUB6 86 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 ADAP1O75689 374 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 NXPH3O95157 252 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 P0C879 139 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 SLC35B1P78383 322 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 SRSF4Q08170 494 aaKnown RBP9.35□□□□□ -0.91
CUX1-210ENST00000497815 Q6ZRM9 215 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 OR5AU1Q8NGC0 362 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 SGMS2Q8NHU3 365 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 ZNF431Q8TF32 576 aaPredicted RBP9.35□□□□□ -0.91
CUX1-210ENST00000497815 WFDC12Q8WWY7 111 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 SPIN2AQ99865 258 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 SPIN2BQ9BPZ2 258 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 MARVELD1Q9BSK0 173 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 QTRT1Q9BXR0 403 aaKnown RBP9.35□□□□□ -0.91
CUX1-210ENST00000497815 CACNG5Q9UF02 275 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 SHPKQ9UHJ6 478 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 C2CD3Q4AC94 2353 aa9.35□□□□□ -0.91
CUX1-210ENST00000497815 A0A1B0GW64 132 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 A0A1W2PN81 502 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 CGB1A6NKQ9 187 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 DHFRP00374 187 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 IL5P05113 134 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 CHRNA7P36544 502 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 KRTAP10-3P60369 221 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 TMEM267Q0VDI3 215 aaPredicted RBP9.34□□□□□ -0.91
CUX1-210ENST00000497815 SPINK9Q5DT21 86 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 ASPHD1Q5U4P2 390 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 FAM219AQ8IW50 185 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 CADM3Q8N126 398 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 C3orf56Q8N813 242 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 LRTM2Q8N967 370 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 OR5T1Q8NG75 326 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 MITD1Q8WV92 249 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 LSM10Q969L4 123 aaKnown RBP9.34□□□□□ -0.91
CUX1-210ENST00000497815 GON7Q9BXV9 100 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 GPN1Q9HCN4 374 aaPredicted RBP9.34□□□□□ -0.91
CUX1-210ENST00000497815 TMEM14BQ9NUH8 114 aa9.34□□□□□ -0.91
CUX1-210ENST00000497815 FOXA2Q9Y261 457 aaPredicted RBP9.34□□□□□ -0.91
CUX1-210ENST00000497815 PIGBOS1A0A0B4J2F0 54 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 DUXBA0A1W2PPF3 345 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 TEX22C9J3V5 150 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 ST8SIA3O43173 380 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 IFNA17P01571 189 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 REG1AP05451 166 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 TRAPPC2P0DI81 140 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 TRAPPC2BP0DI82 140 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 SULT1A3P0DMM9 295 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 SULT1A4P0DMN0 295 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 CD28P10747 220 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 AREGP15514 252 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 CRIP2P52943 208 aaPredicted RBP9.33□□□□□ -0.92
CUX1-210ENST00000497815 CFHR3Q02985 330 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 AKIRIN2Q53H80 203 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 NMSQ5H8A3 153 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 GGNBP1Q5YKI7 109 aa9.33□□□□□ -0.92
CUX1-210ENST00000497815 LCNL1Q6ZST4 164 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms