RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 IAPPP10997 89 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 F2RP25116 425 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 CD40P25942 277 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 ZNF726P1Q15940 193 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 TPTE2P1Q5T6R2 138 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 GFRALQ6UXV0 394 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 ZNF826PQ6ZT77 177 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 CISD2Q8N5K1 135 aaKnown RBP9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 Q8TCH9 128 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 COQ2Q96H96 371 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 ATP5SQ99766 215 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 TRAPPC2LQ9UL33 140 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 FAM186AA6NE01 2351 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 CEBPZOSA8MTT3 80 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 WNT9BO14905 357 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 RAB9AP51151 201 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 PAX2Q02962 417 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 KIAA2026Q5HYC2 2103 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 ZNF787Q6DD87 383 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 OR4X1Q8NH49 305 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 TMEM18Q96B42 140 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 RBMXL1Q96E39 390 aaKnown RBP9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 CITED2Q99967 270 aaPredicted RBP9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 FKBP11Q9NYL4 201 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 KCNIP1Q9NZI2 227 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 MRPL27Q9P0M9 148 aaKnown RBP9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 OR1A1Q9P1Q5 309 aa9.61□□□□□ -0.87
SNRNP200-208ENST00000497539 A0A1B0GU03 582 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 C16orf97H3BN30 126 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 ZNF737O75373 536 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 VDAC1P21796 283 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 ARL16Q0P5N6 197 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 EIF4EBP1Q13541 118 aaPredicted RBP9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 Q6ZRM9 215 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 ZNF295-AS1Q8N0V1 137 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 LRRC29Q8WV35 223 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 PEF1Q9UBV8 284 aaKnown RBP9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 RNF212BA8MTL3 300 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 RBMXL2O75526 392 aaKnown RBP9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 IFNA5P01569 189 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 ELLP55199 621 aaPredicted RBP9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 HERV-K104P63124 156 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 ADIRFQ15847 76 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 TMEM249Q2WGJ8 235 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 OR4A47Q6IF82 309 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 LRP11Q86VZ4 500 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 OR2Z1Q8NG97 314 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 UBALD1Q8TB05 177 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 LSM10Q969L4 123 aaKnown RBP9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 SNRNP40Q96DI7 357 aaKnown RBP9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 FZR1Q9UM11 496 aa9.6□□□□□ -0.87
SNRNP200-208ENST00000497539 G3V4G9 280 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 HBE1P02100 147 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 BCL2P10415 239 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 COL10A1Q03692 680 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 FAM27E3Q08E93 113 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 CD177Q8N6Q3 437 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 ST6GALNAC3Q8NDV1 305 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 CIB3Q96Q77 187 aaPredicted RBP9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 SDF2L1Q9HCN8 221 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 ERRFI1Q9UJM3 462 aaPredicted RBP9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 CNOT1A5YKK6 2376 aaKnown RBP9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 URB1O60287 2271 aaKnown RBP9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 C12orf77C9JDV5 145 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 EGR1P18146 543 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 VKORC1Q9BQB6 163 aa9.59□□□□□ -0.87
SNRNP200-208ENST00000497539 A4D1N5 150 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 TSPAN13O95857 204 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 OR10J4P0C629 311 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 PSG2P11465 335 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 PRDX2P32119 198 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 RAB31Q13636 194 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 TDRG1Q3Y452 100 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 TCTEX1D1Q8N7M0 179 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 HINT2Q9BX68 163 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 LIN7CQ9NUP9 197 aaKnown RBP9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 LAMP3Q9UQV4 416 aa9.59□□□□□ -0.88
SNRNP200-208ENST00000497539 DMXL1Q9Y485 3027 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 PRRC2CQ9Y520 2896 aaKnown RBP9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 IGKV1D-17A0A075B6S4 117 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 THBDP07204 575 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 BAXQ07812 192 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 ZNF645Q8N7E2 425 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 PPP1R35Q8TAP8 253 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 SCGB1C1Q8TD33 95 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 IL1F10Q8WWZ1 152 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 GALMQ96C23 342 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 C15orf65H3BRN8 121 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 RND2P52198 227 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 MMDQ15546 238 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 TEX43Q6ZNM6 134 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 C22orf34Q6ZV56 151 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 C16orf82Q7Z2V1 217 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 TMEM37Q8WXS4 190 aa9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 CISD1Q9NZ45 108 aaKnown RBP9.58□□□□□ -0.88
SNRNP200-208ENST00000497539 ZFHX2Q9C0A1 2572 aaPredicted RBP9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 B4DEV8 164 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 MGST3O14880 152 aa9.57□□□□□ -0.88
SNRNP200-208ENST00000497539 SCGB1D1O95968 90 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms