RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 SPCS2Q15005 226 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 CADM3Q8N126 398 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 FCAMRQ8WWV6 532 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 B9D2Q9BPU9 175 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 SRSF8Q9BRL6 282 aaKnown RBP13.08□□□□□ -0.32
COMMD3-214ENST00000496071 RSRP1Q9BUV0 290 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 FAM212BQ9NTI7 297 aaPredicted RBP13.08□□□□□ -0.32
COMMD3-214ENST00000496071 TMEM140Q9NV12 185 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 KLK11Q9UBX7 282 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 MTFP1Q9UDX5 166 aa13.08□□□□□ -0.32
COMMD3-214ENST00000496071 LSM4Q9Y4Z0 139 aaKnown RBP13.08□□□□□ -0.32
COMMD3-214ENST00000496071 DNAH3Q8TD57 4116 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 RBMXL2O75526 392 aaKnown RBP13.07□□□□□ -0.32
COMMD3-214ENST00000496071 LY86O95711 162 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 HIST1H1BP16401 226 aaKnown RBP13.07□□□□□ -0.32
COMMD3-214ENST00000496071 TBPP20226 339 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 PSMB6P28072 239 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 LPAR6P43657 344 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 DEFA5Q01523 94 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 CD69Q07108 199 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 EXOSC2Q13868 293 aaKnown RBP13.07□□□□□ -0.32
COMMD3-214ENST00000496071 RPEL1Q2QD12 228 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 RNASE10Q5GAN6 216 aaKnown RBP13.07□□□□□ -0.32
COMMD3-214ENST00000496071 THOC7Q6I9Y2 204 aaKnown RBP13.07□□□□□ -0.32
COMMD3-214ENST00000496071 SLC38A6Q8IZM9 456 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 OR52I2Q8NH67 350 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 ABHD1Q96SE0 405 aa13.07□□□□□ -0.32
COMMD3-214ENST00000496071 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.06□□□□□ -0.32
COMMD3-214ENST00000496071 A0A1B0GW64 132 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 MARCH11A6NNE9 402 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 NOL3O60936 208 aaKnown RBP13.06□□□□□ -0.32
COMMD3-214ENST00000496071 OR2J3O76001 311 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 CTRB1P17538 263 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 OR2B8PP59922 312 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 MRPS10P82664 201 aaKnown RBP13.06□□□□□ -0.32
COMMD3-214ENST00000496071 KLK9Q2XQG4 91 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 C15orf32Q32M92 178 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 RNASE12Q5GAN4 147 aaKnown RBP13.06□□□□□ -0.32
COMMD3-214ENST00000496071 CTRB2Q6GPI1 263 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 ARRDC1Q8N5I2 433 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 OR9G4Q8NGQ1 327 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 MIXL1Q9H2W2 232 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 RABL2AQ9UBK7 228 aaPredicted RBP13.06□□□□□ -0.32
COMMD3-214ENST00000496071 FBXL7Q9UJT9 491 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 KLK9Q9UKQ9 250 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 RABL2BQ9UNT1 228 aa13.06□□□□□ -0.32
COMMD3-214ENST00000496071 TRAV3A0A0B4J244 114 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 CGB1A6NKQ9 187 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 GABARAPH6UMI1 98 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 M0QYG6 137 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 CTDSP2O14595 271 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 TRBV12-3P01733 135 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 DEFA4P12838 97 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 MYOD1P15172 320 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 AREGP15514 252 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 SYNJ2BPP57105 145 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 SSBP1Q04837 148 aaKnown RBP13.05□□□□□ -0.32
COMMD3-214ENST00000496071 ZNF585BQ52M93 769 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 PHLDA2Q53GA4 152 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 HSD17B13Q7Z5P4 300 aaPredicted RBP13.05□□□□□ -0.32
COMMD3-214ENST00000496071 DYNC2LI1Q8TCX1 351 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 CCDC59Q9P031 241 aaKnown RBP13.05□□□□□ -0.32
COMMD3-214ENST00000496071 SORL1Q92673 2214 aa13.05□□□□□ -0.32
COMMD3-214ENST00000496071 SNAPC5O75971 98 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 KRASP01116 189 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 CD3DP04234 171 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 SPNP16150 400 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 TBC1D26Q86UD7 250 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 LAX1Q8IWV1 398 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 TMEM229BQ8NBD8 167 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 ZNF486Q96H40 463 aaPredicted RBP13.04□□□□□ -0.32
COMMD3-214ENST00000496071 FANCD2OSQ96PS1 177 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 QTRT1Q9BXR0 403 aaKnown RBP13.04□□□□□ -0.32
COMMD3-214ENST00000496071 FKBP11Q9NYL4 201 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 PEMTQ9UBM1 199 aa13.04□□□□□ -0.32
COMMD3-214ENST00000496071 BMPR1BO00238 502 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 CYB5BO43169 146 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 IGLV1-51P01701 117 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 TRAPPC2P0DI81 140 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 TRAPPC2BP0DI82 140 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 GP9P14770 177 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 RPA2P15927 270 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 PTBP1P26599 531 aaKnown RBP eCLIP13.03□□□□□ -0.32
COMMD3-214ENST00000496071 G6PCP35575 357 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 TAS2R19P59542 299 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 LHFPL1Q86WI0 220 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 OR1L8Q8NGR8 309 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 TSC22D3Q99576 134 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 SIGLEC8Q9NYZ4 499 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 THYN1Q9P016 225 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 SMAD5-AS1Q9Y6J3 95 aa13.03□□□□□ -0.32
COMMD3-214ENST00000496071 IGLV11-55A0A075B6I3 123 aa13.02□□□□□ -0.33
COMMD3-214ENST00000496071 TEX50A0A1B0GTY4 177 aa13.02□□□□□ -0.33
COMMD3-214ENST00000496071 IGLC7A0M8Q6 106 aa13.02□□□□□ -0.33
COMMD3-214ENST00000496071 GGCTO75223 188 aaKnown RBP13.02□□□□□ -0.33
COMMD3-214ENST00000496071 NDUFB8O95169 186 aa13.02□□□□□ -0.33
COMMD3-214ENST00000496071 RAB3DO95716 219 aa13.02□□□□□ -0.33
COMMD3-214ENST00000496071 CD74P04233 296 aa13.02□□□□□ -0.33
COMMD3-214ENST00000496071 NHLRC4P0CG21 123 aaPredicted RBP13.02□□□□□ -0.33
COMMD3-214ENST00000496071 PGAM2P15259 253 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms