RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 IL6RP08887 468 aaPredicted RBP13.58□□□□□ -0.24
HDAC4-211ENST00000494800 DEFA4P12838 97 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 SSBP1Q04837 148 aaKnown RBP13.58□□□□□ -0.24
HDAC4-211ENST00000494800 PHLDA2Q53GA4 152 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 ACSM6Q6P461 480 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 OR6Q1Q8NGQ2 317 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 DYNC2LI1Q8TCX1 351 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 ABHD1Q96SE0 405 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 RSRP1Q9BUV0 290 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 AKIP1Q9NQ31 210 aa13.58□□□□□ -0.24
HDAC4-211ENST00000494800 TRBV9A0A0B4J1U6 114 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 GABARAPH6UMI1 98 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 CTDSP2O14595 271 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 CYB5BO43169 146 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 SNAPC5O75971 98 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 LY86O95711 162 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 PRH1P02810 166 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 HIST1H1BP16401 226 aaKnown RBP13.57□□□□□ -0.24
HDAC4-211ENST00000494800 PSMB6P28072 239 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 LPAR6P43657 344 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 TAS2R19P59542 299 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 DEFA5Q01523 94 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 EXOSC2Q13868 293 aaKnown RBP13.57□□□□□ -0.24
HDAC4-211ENST00000494800 RPEL1Q2QD12 228 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 THOC7Q6I9Y2 204 aaKnown RBP13.57□□□□□ -0.24
HDAC4-211ENST00000494800 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 SRSF8Q9BRL6 282 aaKnown RBP13.57□□□□□ -0.24
HDAC4-211ENST00000494800 C6orf62Q9GZU0 229 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-211ENST00000494800 MIXL1Q9H2W2 232 aa13.57□□□□□ -0.24
HDAC4-211ENST00000494800 FAM212BQ9NTI7 297 aaPredicted RBP13.57□□□□□ -0.24
HDAC4-211ENST00000494800 OR2J3O76001 311 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 KRASP01116 189 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 CD3DP04234 171 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 PGAM2P15259 253 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 ZNF45Q02386 682 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 IL18Q14116 193 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 C15orf32Q32M92 178 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 HSD17B13Q7Z5P4 300 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-211ENST00000494800 TBC1D26Q86UD7 250 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 TMEM229BQ8NBD8 167 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 ISOC1Q96CN7 298 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 ZNF486Q96H40 463 aaPredicted RBP13.56□□□□□ -0.24
HDAC4-211ENST00000494800 TSC22D3Q99576 134 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 QTRT1Q9BXR0 403 aaKnown RBP13.56□□□□□ -0.24
HDAC4-211ENST00000494800 DNAH3Q8TD57 4116 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 TGP01266 2768 aa13.56□□□□□ -0.24
HDAC4-211ENST00000494800 H3BMQ9 156 aa13.55□□□□□ -0.24
HDAC4-211ENST00000494800 CRYGCP07315 174 aa13.55□□□□□ -0.24
HDAC4-211ENST00000494800 RPA2P15927 270 aa13.55□□□□□ -0.24
HDAC4-211ENST00000494800 OR2B8PP59922 312 aa13.55□□□□□ -0.24
HDAC4-211ENST00000494800 CADM3Q8N126 398 aa13.55□□□□□ -0.24
HDAC4-211ENST00000494800 PRR25Q96S07 402 aa13.55□□□□□ -0.24
HDAC4-211ENST00000494800 FKBP11Q9NYL4 201 aa13.55□□□□□ -0.24
HDAC4-211ENST00000494800 FBXL7Q9UJT9 491 aa13.55□□□□□ -0.24
HDAC4-211ENST00000494800 CCDC160A6NGH7 325 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 E7EUB6 86 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 RAB3DO95716 219 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 SERPINE2P07093 398 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 AREGP15514 252 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 CTRB1P17538 263 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 G6PCP35575 357 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 CD69Q07108 199 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 KLF5Q13887 457 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-211ENST00000494800 MEF2DQ14814 521 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 CTRB2Q6GPI1 263 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 STEAP1BQ6NZ63 245 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 OR9G4Q8NGQ1 327 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 ZFAND1Q8TCF1 268 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 THYN1Q9P016 225 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 PEMTQ9UBM1 199 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 PRNDQ9UKY0 176 aa13.54□□□□□ -0.24
HDAC4-211ENST00000494800 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.53□□□□□ -0.24
HDAC4-211ENST00000494800 TRAV3A0A0B4J244 114 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 CTDSPLO15194 276 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 REG1AP05451 166 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 SYNJ2BPP57105 145 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 SCGB2B2Q4G0G5 96 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 ZNF585BQ52M93 769 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 OR1L8Q8NGR8 309 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 TERB2Q8NHR7 220 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 MCFD2Q8NI22 146 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 SMIM4Q8WVI0 70 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 EEF1AKMT3Q96AZ1 226 aa13.53□□□□□ -0.24
HDAC4-211ENST00000494800 RSL24D1Q9UHA3 163 aaKnown RBP13.53□□□□□ -0.24
HDAC4-211ENST00000494800 A0A1B0GW64 132 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 RBMXL2O75526 392 aaKnown RBP13.52□□□□□ -0.25
HDAC4-211ENST00000494800 CD74P04233 296 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 MYOD1P15172 320 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 RND3P61587 244 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 H2BFWTQ7Z2G1 175 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 LHFPL1Q86WI0 220 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 CCDC71LQ8N9Z2 235 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 CXorf58Q96LI9 332 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 B9D2Q9BPU9 175 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 HINT2Q9BX68 163 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 COPZ2Q9P299 210 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 OR51B2Q9Y5P1 312 aa13.52□□□□□ -0.25
HDAC4-211ENST00000494800 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms