RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 CACNA1GO43497 2377 aa12.69□□□□□ -0.38
SDF4-207ENST00000494748 SPENQ96T58 3664 aaKnown RBP12.69□□□□□ -0.38
SDF4-207ENST00000494748 VKORC1L1Q8N0U8 176 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 OR52E5Q8NH55 327 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 FAM166BA8MTA8 275 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 IQCF6A8MYZ5 107 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 AHRRA9YTQ3 701 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 PCP4P48539 62 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 RELBQ01201 579 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 TIPARPQ7Z3E1 657 aaKnown RBP12.68□□□□□ -0.38
SDF4-207ENST00000494748 ZNF576Q9H609 170 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 PILRBQ9UKJ0 227 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 TCF21O43680 179 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 DCTN5Q9BTE1 182 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 TTTY12Q9BZ98 90 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 C12orf49Q9H741 205 aa12.68□□□□□ -0.38
SDF4-207ENST00000494748 FAM90A1Q86YD7 464 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 STPG3Q8N7X2 389 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 PRR7Q8TB68 274 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 LNP1A1A4G5 178 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 ZNF891A8MT65 544 aaPredicted RBP12.67□□□□□ -0.38
SDF4-207ENST00000494748 BMPR1BO00238 502 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 IGLV2-8P01709 118 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 KIAA1644Q3SXP7 199 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 CXorf67Q86X51 503 aaPredicted RBP12.67□□□□□ -0.38
SDF4-207ENST00000494748 NINJ1Q92982 152 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 ZNF586Q9NXT0 402 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 FOXJ2Q9P0K8 574 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 CGAP01215 116 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 PRR20EP86478 221 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 PRR20CP86479 221 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 PRR20DP86480 221 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 PRR20BP86481 221 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 PRR20AP86496 221 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 GABRA6Q16445 453 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 ANKRD39Q53RE8 183 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 CENPWQ5EE01 88 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 ACP7Q6ZNF0 438 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 RFESDQ8TAC1 157 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 SLC25A40Q8TBP6 338 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 CT55Q8WUE5 264 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 ZNF503Q96F45 646 aa12.67□□□□□ -0.38
SDF4-207ENST00000494748 RNASE7Q9H1E1 156 aaKnown RBP12.67□□□□□ -0.38
SDF4-207ENST00000494748 CCL25O15444 150 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 C3orf79P0CE67 100 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 MPV17P39210 176 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 GABRA2P47869 451 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 CXCL12P48061 93 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 C1orf229Q6ZS94 237 aaPredicted RBP12.66□□□□□ -0.38
SDF4-207ENST00000494748 J3QW42 95 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 FCGR3BO75015 233 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 ZNF253O75346 499 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 REG1AP05451 166 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 LINC00869P0C866 280 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 TMEM251Q8N6I4 163 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 UHRF2Q96PU4 802 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 UQCR10Q9UDW1 63 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 TBC1D28Q2M2D7 210 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 ASCL3Q9NQ33 180 aa12.66□□□□□ -0.38
SDF4-207ENST00000494748 ROS1P08922 2347 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 SPINK4O60575 86 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 ZNF324O75467 553 aaPredicted RBP12.65□□□□□ -0.38
SDF4-207ENST00000494748 AMTP48728 403 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 MIR17HGQ75NE6 70 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 DOLPP1Q86YN1 238 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 NAT8BQ9UHF3 227 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 PRRX1P54821 245 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 RBX1P62877 108 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 SSPNQ14714 243 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 MAJINQ3KP22 176 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 PRAMEF5Q5TYX0 476 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 PRAMEF6Q5VXH4 476 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 FAM214BQ7L5A3 538 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 NPVFQ9HCQ7 196 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 HEYLQ9NQ87 328 aaPredicted RBP12.65□□□□□ -0.38
SDF4-207ENST00000494748 LAMTOR2Q9Y2Q5 125 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 DSCAML1Q8TD84 2053 aa12.65□□□□□ -0.38
SDF4-207ENST00000494748 TRGV8A0A0C4DH27 118 aa12.65□□□□□ -0.39
SDF4-207ENST00000494748 A8MXE2 369 aa12.65□□□□□ -0.39
SDF4-207ENST00000494748 MT-ND6P03923 174 aa12.65□□□□□ -0.39
SDF4-207ENST00000494748 RHOBP62745 196 aa12.65□□□□□ -0.39
SDF4-207ENST00000494748 SUMO1P63165 101 aaKnown RBP12.65□□□□□ -0.39
SDF4-207ENST00000494748 HTD2P86397 168 aa12.65□□□□□ -0.39
SDF4-207ENST00000494748 RNASE8Q8TDE3 154 aaKnown RBP12.65□□□□□ -0.39
SDF4-207ENST00000494748 TSKUQ8WUA8 353 aa12.65□□□□□ -0.39
SDF4-207ENST00000494748 STARD4Q96DR4 205 aa12.65□□□□□ -0.39
SDF4-207ENST00000494748 MED13Q9UHV7 2174 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 SMIM27A0A1W2PRY6 76 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 RPP30P78346 268 aaKnown RBP12.64□□□□□ -0.39
SDF4-207ENST00000494748 SLC35B1P78383 322 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 FXYD3Q14802 87 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 OR4P4Q8NGL7 312 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 OR5G3P0C626 314 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 PMCHP20382 165 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 UTF1Q5T230 341 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 PQLC2Q6ZP29 291 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 Q6ZVH6 145 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 ORAOV1Q8WV07 137 aa12.64□□□□□ -0.39
SDF4-207ENST00000494748 IGF2BP2-AS1Q96M15 143 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 1049.9 ms