RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	MAS1L	P35410	378 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	KIR2DS2	P43631	304 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	RPL27A	P46776	148 aa	Known RBP	5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	MXD1	Q05195	221 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	GUCA2B	Q16661	112 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	HAGH	Q16775	308 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	C15orf32	Q32M92	178 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	FAM106A	Q4KMX7	169 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	ZFAND6	Q6FIF0	208 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	IL34	Q6ZMJ4	242 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	ZNF66	Q6ZN08	573 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	SSX9	Q7RTT3	188 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	VKORC1L1	Q8N0U8	176 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	SPART	Q8N0X7	666 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	SECTM1	Q8WVN6	248 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	OR2A7	Q96R45	310 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	TM2D3	Q9BRN9	247 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	YTHDF1	Q9BYJ9	559 aa	Known RBP	5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	HRASLS	Q9HDD0	168 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	DIABLO	Q9NR28	239 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	SLC2A8	Q9NY64	477 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	TAS2R8	Q9NYW2	309 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	ANXA10	Q9UJ72	324 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	ZNF257	Q9Y2Q1	563 aa		5.73	□□□□□ -1.49
RBM39-238	ENST00000493853	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	TRBV9	A0A0B4J1U6	114 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	ZNF320	A2RRD8	509 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	HMX3	A6NHT5	357 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	BMPR1B	O00238	502 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	GGCT	O75223	188 aa	Known RBP	5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	OR2C1	O95371	312 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	FCGR2C	P31995	323 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	SDC2	P34741	201 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	CD81	P60033	236 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	RPL30	P62888	115 aa	Known RBP	5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	RPL8	P62917	257 aa	Known RBP	5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	MRGPRG-AS1	Q2M3A8	158 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	C10orf55	Q5SWW7	151 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	IDNK	Q5T6J7	187 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	SFXN4	Q6P4A7	337 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	NR2C2AP	Q86WQ0	139 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	BEST4	Q8NFU0	473 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	LGALS14	Q8TCE9	139 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	SLC2A9	Q9NRM0	540 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	RHBDL2	Q9NX52	303 aa		5.72	□□□□□ -1.49
RBM39-238	ENST00000493853	IGKV1D-13	A0A0B4J2D9	117 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	LOC100506127	A0A0U1RQW1	187 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	IZUMO1R	A6ND01	250 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	NPIPB5	A8MRT5	1133 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	PPP5D1	E7EU14	171 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	CYB5B	O43169	146 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	TNFSF12	O43508	249 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	RBMXL2	O75526	392 aa	Known RBP	5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	KBTBD11	O94819	623 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	IGKV1-13	P0DP09	117 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	FOLR2	P14207	255 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	HIST1H1B	P16401	226 aa	Known RBP	5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	ARL3	P36405	182 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	ZNF45	Q02386	682 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	CATR1	Q13166	79 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	CD300E	Q496F6	205 aa	Predicted RBP	5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	CLEC19A	Q6UXS0	136 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	SLC16A13	Q7RTY0	426 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	LAX1	Q8IWV1	398 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	SPAG16	Q8N0X2	631 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	ZBTB34	Q8NCN2	500 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	OR13F1	Q8NGS4	319 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	TMEM167A	Q8TBQ9	72 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	EEF1AKMT3	Q96AZ1	226 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	NEURL2	Q9BR09	285 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	COMMD5	Q9GZQ3	224 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	SLC5A7	Q9GZV3	580 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	PLEKHA3	Q9HB20	300 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	CCL28	Q9NRJ3	127 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	TECR	Q9NZ01	308 aa	Known RBP	5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	ETV7	Q9Y603	341 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853	CEPT1	Q9Y6K0	416 aa		5.71	□□□□□ -1.5
RBM39-238	ENST00000493853		A0A0A6YYH2	397 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853		A6NJ64	397 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	OR11H12	B2RN74	326 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	TEX22	C9J3V5	150 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	SULT1C2	O00338	296 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	SSX5	O60225	188 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	ATP6V1G2	O95670	118 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	PPY	P01298	95 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	IGHV3-23	P01764	117 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	HLA-A	P01891	365 aa	Known RBP	5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	FCER2	P06734	321 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	IL6R	P08887	468 aa	Predicted RBP	5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	ZNF735	P0CB33	412 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	HLA-G	P17693	338 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	PSMB6	P28072	239 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	CBX5	P45973	191 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	FXYD4	P59646	89 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	HERV-K104	P61576	105 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	DEFB114	Q30KQ6	69 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	TOR2A	Q5JU69	321 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	OR4A47	Q6IF82	309 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	ZNF773	Q6PK81	442 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	GPHB5	Q86YW7	130 aa		5.7	□□□□□ -1.5

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