RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 OR10G4Q8NGN3 311 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 OR4C13Q8NGP0 309 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 OR13D1Q8NGV5 346 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 LHX4Q969G2 390 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 FLYWCH2Q96CP2 140 aaKnown RBP8.18□□□□□ -1.1
PRPF3-206ENST00000493553 OR4C12Q96R67 309 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 NKX6-2Q9C056 277 aaPredicted RBP8.18□□□□□ -1.1
PRPF3-206ENST00000493553 SLC35B3Q9H1N7 401 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 SH3BGRL3Q9H299 93 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 TMEM133Q9H2Q1 129 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 CHODLQ9H9P2 273 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 TCF19Q9Y242 345 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 DIDO1Q9BTC0 2240 aaKnown RBP8.18□□□□□ -1.1
PRPF3-206ENST00000493553 ATRXP46100 2492 aa8.18□□□□□ -1.1
PRPF3-206ENST00000493553 ABCA4P78363 2273 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 A0A1W2PN81 502 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 INS-IGF2F8WCM5 200 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 UPK2O00526 184 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 SLC31A2O15432 143 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 NXPH3O95157 252 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 HSPB1P04792 205 aaKnown RBP8.17□□□□□ -1.1
PRPF3-206ENST00000493553 LIPFP07098 398 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 SFTA3P0C7M3 94 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 CT45A6P0DMU7 189 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 CT45A5P0DMU8 189 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 CT45A7P0DMV0 189 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 IGHV1-8P0DP01 117 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 CHRNA7P36544 502 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 GNG10P50151 68 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 DLX6P56179 175 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 KRTAP10-2P60368 255 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 LY6DQ14210 128 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 ZNF273Q14593 569 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 VMA21Q3ZAQ7 101 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 KHDC3LQ587J8 217 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 OR4A47Q6IF82 309 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 C1orf122Q6ZSJ8 110 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 TGIF2LYQ8IUE0 185 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 TGIF2LXQ8IUE1 241 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 ZCCHC24Q8N2G6 241 aaKnown RBP8.17□□□□□ -1.1
PRPF3-206ENST00000493553 ABHD12Q8N2K0 398 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 BEND2Q8NDZ0 799 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 SFT2D1Q8WV19 159 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 NEUROG1Q92886 237 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 MBD6Q96DN6 1003 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 RNF5Q99942 180 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 QTRT1Q9BXR0 403 aaKnown RBP8.17□□□□□ -1.1
PRPF3-206ENST00000493553 KRTAP4-2Q9BYR5 136 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 NARFLQ9H6Q4 476 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 DCAF16Q9NXF7 216 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 WASHC3Q9Y3C0 194 aa8.17□□□□□ -1.1
PRPF3-206ENST00000493553 RBFOX3A6NFN3 312 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 M0R1W7 72 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 CYB5BO43169 146 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 DSCAMO60469 2012 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 IL6RP08887 468 aaPredicted RBP8.16□□□□□ -1.1
PRPF3-206ENST00000493553 OR9G9P0C7N8 305 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 CD1BP29016 333 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 MAS1LP35410 378 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 VDAC2P45880 294 aaPredicted RBP8.16□□□□□ -1.1
PRPF3-206ENST00000493553 SUB1P53999 127 aaKnown RBP eCLIP8.16□□□□□ -1.1
PRPF3-206ENST00000493553 PRCDQ00LT1 54 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 SPTBN1Q01082 2364 aaKnown RBP8.16□□□□□ -1.1
PRPF3-206ENST00000493553 ACOT6Q3I5F7 207 aaPredicted RBP8.16□□□□□ -1.1
PRPF3-206ENST00000493553 C11orf71Q6IPW1 123 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
PRPF3-206ENST00000493553 LYPD2Q6UXB3 125 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 SSX9Q7RTT3 188 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 OR1L8Q8NGR8 309 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 FAM122AQ96E09 287 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 KRTAP4-11Q9BYQ6 195 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 ACTR3CQ9C0K3 210 aaPredicted RBP8.16□□□□□ -1.1
PRPF3-206ENST00000493553 COMMD5Q9GZQ3 224 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 PLEKHA3Q9HB20 300 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 OR51B2Q9Y5P1 312 aa8.16□□□□□ -1.1
PRPF3-206ENST00000493553 PPIAL4CA0A0B4J2A2 164 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 UBE2L5PA0A1B0GUS4 154 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 C15orf62A8K5M9 175 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 H0YJW9 148 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 AGPAT2O15120 278 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 PLAUP00749 431 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 IFNA4P05014 189 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 PPIAL4GP0DN37 164 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 FGF7P21781 194 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 NPY1RP25929 384 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 CEACAM3P40198 252 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 COMPP49747 757 aaPredicted RBP8.15□□□□□ -1.1
PRPF3-206ENST00000493553 RPL8P62917 257 aaKnown RBP8.15□□□□□ -1.1
PRPF3-206ENST00000493553 ERHP84090 104 aaKnown RBP8.15□□□□□ -1.1
PRPF3-206ENST00000493553 TMEM249Q2WGJ8 235 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 SOHLH1Q5JUK2 328 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 ZNF506Q5JVG8 444 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 WDR25Q64LD2 544 aaPredicted RBP8.15□□□□□ -1.1
PRPF3-206ENST00000493553 FAM53AQ6NSI3 398 aaPredicted RBP8.15□□□□□ -1.1
PRPF3-206ENST00000493553 HAPLN4Q86UW8 402 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 SLC24A4Q8NFF2 622 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 TMEM167AQ8TBQ9 72 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 CACNG8Q8WXS5 425 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 LEAP2Q969E1 77 aa8.15□□□□□ -1.1
PRPF3-206ENST00000493553 HARBI1Q96MB7 349 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms