RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 PSMB6P28072 239 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 GNB1P62873 340 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 RPL30P62888 115 aaKnown RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 SUPT4H1P63272 117 aaKnown RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 RAB31Q13636 194 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 FXYD3Q14802 87 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 PSG5Q15238 335 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 KLF17Q5JT82 389 aaPredicted RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 GGNBP1Q5YKI7 109 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 HCP5Q6MZN7 132 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 LYZL2Q7Z4W2 148 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 FAM71E2Q8N5Q1 922 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 SIGLECL1Q8N7X8 197 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 OR4F5Q8NH21 305 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 CFHR4Q92496 578 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 DCUN1D4Q92564 292 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 TMEM230Q96A57 120 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 PINX1Q96BK5 328 aaKnown RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 HYLS1Q96M11 299 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 SEC22CQ9BRL7 303 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 QTRT1Q9BXR0 403 aaKnown RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 ZNF436Q9C0F3 470 aaPredicted RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 PARP12Q9H0J9 701 aaKnown RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 SLA2Q9H6Q3 261 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 CACNG5Q9UF02 275 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 PFDN2Q9UHV9 154 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 FOXA2Q9Y261 457 aaPredicted RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 NSG2Q9Y328 171 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 SIGLEC9Q9Y336 463 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 STRAPQ9Y3F4 350 aaKnown RBP4.28□□□□□ -1.72
NEK4-205ENST00000493199 WSB1Q9Y6I7 421 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 CSPG4Q6UVK1 2322 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 WNK2Q9Y3S1 2297 aa4.28□□□□□ -1.72
NEK4-205ENST00000493199 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.27□□□□□ -1.733e-7■■■□□ 15.6
NEK4-205ENST00000493199 TMEM89A2RUT3 159 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 A6NDX4 124 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 DBX1A6NMT0 343 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 H3BUA1 57 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 SOX15O60248 233 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 PROP1O75360 226 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 AVPP01185 164 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 IGKV1-16P04430 117 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 IFNA4P05014 189 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 OR8U8P0C7N1 319 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 VSIG10L2P0DP72 767 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 CAV2P51636 162 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 HILS1P60008 231 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 S100A10P60903 97 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 TNFRSF9Q07011 255 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 FOXL1Q12952 345 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 EIF4EBP1Q13541 118 aaPredicted RBP4.27□□□□□ -1.73
NEK4-205ENST00000493199 EXOSC2Q13868 293 aaKnown RBP4.27□□□□□ -1.73
NEK4-205ENST00000493199 LY6EQ16553 131 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 PRSS8Q16651 343 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 ATP6V1FQ16864 119 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 ZNF585BQ52M93 769 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 AKIRIN2Q53H80 203 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 EIF5AL1Q6IS14 154 aaKnown RBP4.27□□□□□ -1.73
NEK4-205ENST00000493199 SLC25A24Q6NUK1 477 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 C5orf24Q7Z6I8 188 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 CENPVQ7Z7K6 275 aaPredicted RBP4.27□□□□□ -1.73
NEK4-205ENST00000493199 PUSL1Q8N0Z8 303 aaKnown RBP4.27□□□□□ -1.73
NEK4-205ENST00000493199 ZBTB8BQ8NAP8 495 aaPredicted RBP4.27□□□□□ -1.73
NEK4-205ENST00000493199 OR10P1Q8NGE3 313 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 OR52B4Q8NGK2 314 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 DTD1Q8TEA8 209 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 ARPC1AQ92747 370 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 CXorf58Q96LI9 332 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 FYTTD1Q96QD9 318 aaKnown RBP4.27□□□□□ -1.73
NEK4-205ENST00000493199 FBXL15Q9H469 300 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 ZNF355PQ9NSJ1 428 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 ZNF580Q9UK33 172 aa4.27□□□□□ -1.73
NEK4-205ENST00000493199 PAIP2BQ9ULR5 123 aaKnown RBP4.27□□□□□ -1.73
NEK4-205ENST00000493199 HIVEP2P31629 2446 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 TRAV30A0A087WSZ9 112 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 BORCS7-ASMTA0A0B4J1R7 106 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 A0A0D9SG52 128 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 INAFM1C9JVW0 142 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 INS-IGF2F8WCM5 200 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 K7EPK0 472 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 TAAR5O14804 337 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 TSC22D2O75157 780 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 ADAP1O75689 374 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 DFFBO76075 338 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 CFDP00746 253 aaPredicted RBP4.26□□□□□ -1.73
NEK4-205ENST00000493199 CA2P00918 260 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 IFNA5P01569 189 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 IGHV4-59P01825 116 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 IGHG2P01859 326 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 OPN1MWP04001 364 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 RNASE1P07998 156 aaKnown RBP4.26□□□□□ -1.73
NEK4-205ENST00000493199 OPN1MW2P0DN77 364 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 OPN1MW3P0DN78 364 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 OR13C7P0DN81 318 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 S100A11P31949 105 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 VDAC2P45880 294 aaPredicted RBP4.26□□□□□ -1.73
NEK4-205ENST00000493199 P2RY1P47900 373 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 NPBWR1P48145 328 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 CX3CL1P78423 397 aa4.26□□□□□ -1.73
NEK4-205ENST00000493199 PRCDQ00LT1 54 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms