RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PRCDQ00LT1 54 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 PEA15Q15121 130 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 C10orf91Q5T1B1 145 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 ETV3LQ6ZN32 361 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 PBDC1Q9BVG4 233 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 MS4A7Q9GZW8 240 aaPredicted RBP11.38□□□□□ -0.59
PTPN7-216ENST00000492977 NARFLQ9H6Q4 476 aa11.38□□□□□ -0.59
PTPN7-216ENST00000492977 TRAV1-1A0A0B4J248 108 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 TEX50A0A1B0GTY4 177 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 HBE1P02100 147 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 RAB2AP61019 212 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 SP5Q6BEB4 398 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-216ENST00000492977 C1orf122Q6ZSJ8 110 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 TMEM167AQ8TBQ9 72 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 SEC11CQ9BY50 192 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 TMEM231Q9H6L2 316 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 PLEKHA3Q9HB20 300 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 FAM96BQ9Y3D0 163 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 CACNA1BQ00975 2339 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 PRSS46E5RG02 174 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 RRHO14718 337 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 NDUFS7O75251 213 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 FGF7P21781 194 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 NPY1RP25929 384 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 CD1BP29016 333 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 RPL8P62917 257 aaKnown RBP11.37□□□□□ -0.59
PTPN7-216ENST00000492977 DLK1P80370 383 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 GUK1Q16774 197 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 TMEM41BQ5BJD5 291 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 SPSB3Q6PJ21 355 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 Q8N7P7 452 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 SLC24A4Q8NFF2 622 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 OR4P4Q8NGL7 312 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 SCRT1Q9BWW7 348 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 SMDT1Q9H4I9 107 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 RPRMQ9NS64 109 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 CARHSP1Q9Y2V2 147 aaKnown RBP11.37□□□□□ -0.59
PTPN7-216ENST00000492977 INSIG2Q9Y5U4 225 aa11.37□□□□□ -0.59
PTPN7-216ENST00000492977 KLF2Q9Y5W3 355 aaPredicted RBP11.37□□□□□ -0.59
PTPN7-216ENST00000492977 C17orf112F2Z3M2 114 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 F8W036 122 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 LY6LH3BQJ8 138 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 SOX15O60248 233 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 MPDU1O75352 247 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 IGLV2-23P01705 113 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 MBP02144 154 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 IFNA4P05014 189 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 COX7A1P24310 79 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 ARF6P62330 175 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 VMA21Q3ZAQ7 101 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 PNKDQ8N490 385 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 ZNF709Q8N972 641 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 OR11H6Q8NGC7 330 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 OR1L8Q8NGR8 309 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 SFT2D1Q8WV19 159 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 TMEM170AQ8WVE7 144 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 MBD3L1Q8WWY6 194 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 RBMXL1Q96E39 390 aaKnown RBP11.36□□□□□ -0.59
PTPN7-216ENST00000492977 HINT2Q9BX68 163 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 COMMD5Q9GZQ3 224 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 WDR83OSQ9Y284 106 aa11.36□□□□□ -0.59
PTPN7-216ENST00000492977 IGHV1-3A0A0C4DH29 117 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 INS-IGF2F8WCM5 200 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 SCO1O75880 301 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 ADCYAP1P18509 176 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 PRTN3P24158 256 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 DLX1P56177 255 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 SVBPQ8N300 66 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 KIR3DL3Q8N743 410 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 RPEQ96AT9 228 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 SPOCK3Q9BQ16 436 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 NPCDR1Q9BY65 106 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 EIF5A2Q9GZV4 153 aaKnown RBP11.35□□□□□ -0.59
PTPN7-216ENST00000492977 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 KIAA1456Q9P272 454 aa11.35□□□□□ -0.59
PTPN7-216ENST00000492977 FAM157AC9JC47 383 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 FNDC10F2Z333 226 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 ENSAO43768 121 aaKnown RBP11.34□□□□□ -0.59
PTPN7-216ENST00000492977 CA2P00918 260 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 IGHV2-5P01817 119 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 SFTA3P0C7M3 94 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 MYOD1P15172 320 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 DEFA5Q01523 94 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 TEX45Q8NA69 505 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 IGFBPL1Q8WX77 278 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 VSIRQ9H7M9 311 aa11.34□□□□□ -0.59
PTPN7-216ENST00000492977 A0A1W2PN81 502 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 M6PRP20645 277 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 HTR1DP28221 377 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 CHRNA7P36544 502 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 CCL20P78556 96 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 C2orf83Q53S99 150 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 MOB3BQ86TA1 216 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 RCC1LQ96I51 464 aaKnown RBP11.33□□□□□ -0.6
PTPN7-216ENST00000492977 BBC3Q96PG8 261 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-216ENST00000492977 RNF5Q99942 180 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 UNKLQ9H9P5 680 aaKnown RBP11.33□□□□□ -0.6
PTPN7-216ENST00000492977 TNCP24821 2201 aa11.33□□□□□ -0.6
PTPN7-216ENST00000492977 HRNRQ86YZ3 2850 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-216ENST00000492977 IGSF10Q6WRI0 2623 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms