RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 PPP5D1E7EU14 171 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 TNFSF12O43508 249 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 NDUFB8O95169 186 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 CLEC2LP0C7M8 214 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 CBLN1P23435 193 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 HERV-K104P61576 105 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 GUCA2BQ16661 112 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 DHRS11Q6UWP2 260 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 CLEC19AQ6UXS0 136 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 LINC00322Q6ZN03 302 aaPredicted RBP9.42□□□□□ -0.9
COL6A1-205ENST00000492851 GVQW1Q8N7I0 195 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 MARC2Q969Z3 335 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 VCX3AQ9NNX9 186 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 IFT46Q9NQC8 304 aa9.42□□□□□ -0.9
COL6A1-205ENST00000492851 IGLV11-55A0A075B6I3 123 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 OR11H12B2RN74 326 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 E7EUB6 86 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 SULT1C2O00338 296 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 UPK2O00526 184 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 CLEC3BP05452 202 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 AREGP15514 252 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 ELLP55199 621 aaPredicted RBP9.41□□□□□ -0.9
COL6A1-205ENST00000492851 FXYD4P59646 89 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 ERVK-16P61578 105 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 NEDD8Q15843 81 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 ZNF57Q68EA5 555 aaPredicted RBP9.41□□□□□ -0.9
COL6A1-205ENST00000492851 ADAMTSL5Q6ZMM2 481 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 CMTM1Q8IZ96 169 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 CADM3Q8N126 398 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 DMBX1Q8NFW5 382 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 COMMD9Q9P000 198 aa9.41□□□□□ -0.9
COL6A1-205ENST00000492851 HUWE1Q7Z6Z7 4374 aaKnown RBP9.4□□□□□ -0.9
COL6A1-205ENST00000492851 TRAV25A0A0B4J276 109 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 A8MWP6 167 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 PTBP1P26599 531 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL6A1-205ENST00000492851 S100GP29377 79 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 GNRHRP30968 328 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 TAS2R46P59540 309 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 OR2B8PP59922 312 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 UBE2NLQ5JXB2 153 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 AADACL3Q5VUY0 350 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 LPCAT3Q6P1A2 487 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 ZNF818PQ6ZRF7 136 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 OR1L6Q8NGR2 347 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 OR6F1Q8NGZ6 308 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 VN1R17PQ8TDU5 208 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 CCDC140Q96MF4 163 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 GPHA2Q96T91 129 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 ATP6V0BQ99437 205 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 QTRT1Q9BXR0 403 aaKnown RBP9.4□□□□□ -0.9
COL6A1-205ENST00000492851 RNF167Q9H6Y7 350 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 PLEKHA3Q9HB20 300 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 FKBP11Q9NYL4 201 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
COL6A1-205ENST00000492851 UFC1Q9Y3C8 167 aa9.4□□□□□ -0.9
COL6A1-205ENST00000492851 RYR3Q15413 4870 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 LCE6AA0A183 80 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 SMIM31A0A1B0GVY4 71 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 A0A1B0GW64 132 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 HLA-AP01891 365 aaKnown RBP9.39□□□□□ -0.91
COL6A1-205ENST00000492851 CD7P09564 240 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 TRAPPC2P0DI81 140 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 TRAPPC2BP0DI82 140 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 PTHLHP12272 177 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 MYOD1P15172 320 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 F2RP25116 425 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 TMEM69Q5SWH9 247 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 PLET1Q6UQ28 207 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 RBPMS2Q6ZRY4 209 aaKnown RBP9.39□□□□□ -0.91
COL6A1-205ENST00000492851 TMEM17Q86X19 198 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 UXS1Q8NBZ7 420 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 TSPAN14Q8NG11 270 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 HIPK2Q9H2X6 1198 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 TMEM140Q9NV12 185 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 EHFQ9NZC4 300 aa9.39□□□□□ -0.91
COL6A1-205ENST00000492851 A0A087WXM4 84 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 TMEM213A2RRL7 107 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 SNAPC5O75971 98 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 IGHV3-23P01764 117 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 REG1AP05451 166 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 PRSS3P35030 304 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 DEFB125Q8N687 156 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 OR52B4Q8NGK2 314 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 OR1L8Q8NGR8 309 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 OR5H2Q8NGV7 314 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 OR51H1Q8NH63 302 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 MOB3AQ96BX8 217 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 WDR89Q96FK6 387 aaPredicted RBP9.38□□□□□ -0.91
COL6A1-205ENST00000492851 CMTM3Q96MX0 182 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 ZNF2Q9BSG1 426 aaPredicted RBP9.38□□□□□ -0.91
COL6A1-205ENST00000492851 SRD5A3Q9H8P0 318 aa9.38□□□□□ -0.91
COL6A1-205ENST00000492851 IGLC7A0M8Q6 106 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 CGB1A6NKQ9 187 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 MARCH11A6NNE9 402 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 PGLYRP1O75594 196 aaPredicted RBP9.37□□□□□ -0.91
COL6A1-205ENST00000492851 SERPINE2P07093 398 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 C8orf88P0DMB2 117 aa9.37□□□□□ -0.91
COL6A1-205ENST00000492851 NAT1P18440 290 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms