RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 HERV-K104P61576 105 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 DEFB114Q30KQ6 69 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 CD300EQ496F6 205 aaPredicted RBP6.63□□□□□ -1.35
NUP50-217ENST00000491860 KCTD21Q4G0X4 260 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 CTRB2Q6GPI1 263 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 OR1L6Q8NGR2 347 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 ATP6V0BQ99437 205 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 SLC5A7Q9GZV3 580 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 AUNIPQ9H7T9 357 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 EDA2RQ9HAV5 297 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 PLEKHA2Q9HB19 425 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 HRASLSQ9HDD0 168 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 IFT46Q9NQC8 304 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 CCL28Q9NRJ3 127 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 STARD9Q9P2P6 4700 aa6.63□□□□□ -1.35
NUP50-217ENST00000491860 XRCC3O43542 346 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 RBMXL2O75526 392 aaKnown RBP6.62□□□□□ -1.35
NUP50-217ENST00000491860 MYOD1P15172 320 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 CBLN1P23435 193 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 DEFA5Q01523 94 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 UBE2NLQ5JXB2 153 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 C10orf55Q5SWW7 151 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 AADACL3Q5VUY0 350 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 ZNF57Q68EA5 555 aaPredicted RBP6.62□□□□□ -1.35
NUP50-217ENST00000491860 LPCAT3Q6P1A2 487 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 LINC00322Q6ZN03 302 aaPredicted RBP6.62□□□□□ -1.35
NUP50-217ENST00000491860 SSX9Q7RTT3 188 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 CMTM1Q8IZ96 169 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 VKORC1L1Q8N0U8 176 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 DMBX1Q8NFW5 382 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 VN1R17PQ8TDU5 208 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 SLC25A38Q96DW6 304 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 FANCD2OSQ96PS1 177 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 QTRT1Q9BXR0 403 aaKnown RBP6.62□□□□□ -1.35
NUP50-217ENST00000491860 FAM212BQ9NTI7 297 aaPredicted RBP6.62□□□□□ -1.35
NUP50-217ENST00000491860 FKBP11Q9NYL4 201 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 UFC1Q9Y3C8 167 aa6.62□□□□□ -1.35
NUP50-217ENST00000491860 IGLV11-55A0A075B6I3 123 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 ZNF320A2RRD8 509 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 IZUMO1RA6ND01 250 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 ZNF785A8K8V0 405 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 OR11H12B2RN74 326 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 PPP5D1E7EU14 171 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 SULT1C2O00338 296 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 UPK2O00526 184 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 TNFSF12O43508 249 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 JTBO76095 146 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 OR2C1O95371 312 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 AREGP15514 252 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 PTBP1P26599 531 aaKnown RBP eCLIP6.61□□□□□ -1.35
NUP50-217ENST00000491860 BRWD1-AS2P59051 145 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 FXYD4P59646 89 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 OR2B8PP59922 312 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 NEDD8Q15843 81 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 GUCA2BQ16661 112 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 TMEM69Q5SWH9 247 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 SPSB3Q6PJ21 355 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 DHRS11Q6UWP2 260 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 CLEC19AQ6UXS0 136 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 ZNF818PQ6ZRF7 136 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 GVQW1Q8N7I0 195 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 TSPAN14Q8NG11 270 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 OR1L8Q8NGR8 309 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 OR5H6Q8NGV6 325 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 CMTM3Q96MX0 182 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 TSC22D3Q99576 134 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 PLEKHA3Q9HB20 300 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 GAR1Q9NY12 217 aaKnown RBP6.61□□□□□ -1.35
NUP50-217ENST00000491860 EHFQ9NZC4 300 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 MRPL27Q9P0M9 148 aaKnown RBP6.61□□□□□ -1.35
NUP50-217ENST00000491860 ADAM30Q9UKF2 790 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 DMRT1Q9Y5R6 373 aa6.61□□□□□ -1.35
NUP50-217ENST00000491860 MARCH11A6NNE9 402 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 SNAPC5O75971 98 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 NDUFB8O95169 186 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 CLEC3BP05452 202 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 TRAPPC2P0DI81 140 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 TRAPPC2BP0DI82 140 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 F2RP25116 425 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 LAMTOR1Q6IAA8 161 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 PLET1Q6UQ28 207 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 RBPMS2Q6ZRY4 209 aaKnown RBP6.6□□□□□ -1.35
NUP50-217ENST00000491860 TMEM17Q86X19 198 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 SLC38A6Q8IZM9 456 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 GDPD1Q8N9F7 314 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 OR52B4Q8NGK2 314 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 OR5H2Q8NGV7 314 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 OR6F1Q8NGZ6 308 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 OR51H1Q8NH63 302 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 ZNF502Q8TBZ5 544 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 LSM10Q969L4 123 aaKnown RBP6.6□□□□□ -1.35
NUP50-217ENST00000491860 MOB3AQ96BX8 217 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 BSCL2Q96G97 398 aaPredicted RBP6.6□□□□□ -1.35
NUP50-217ENST00000491860 CCDC140Q96MF4 163 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 TMEM56Q96MV1 263 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 HIPK2Q9H2X6 1198 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 SRD5A3Q9H8P0 318 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 TMEM140Q9NV12 185 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 PRNDQ9UKY0 176 aa6.6□□□□□ -1.35
NUP50-217ENST00000491860 HYDINQ4G0P3 5121 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms