RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	MARC2	Q969Z3	335 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	CCDC140	Q96MF4	163 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	SRD5A3	Q9H8P0	318 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	DIABLO	Q9NR28	239 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	GAR1	Q9NY12	217 aa	Known RBP	13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	THYN1	Q9P016	225 aa		13.49	□□□□□ -0.25
GGA1-223	ENST00000491295	IGLV11-55	A0A075B6I3	123 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	TRAV18	A0A075B6X5	111 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	TRAV25	A0A0B4J276	109 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	ZNF320	A2RRD8	509 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	CYB5B	O43169	146 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	HPRT1	P00492	218 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	PPY	P01298	95 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	AREG	P15514	252 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	NQO2	P16083	231 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	TIMM50	Q3ZCQ8	353 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	SSX9	Q7RTT3	188 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	GIMAP1	Q8WWP7	306 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	WDR89	Q96FK6	387 aa	Predicted RBP	13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	HRASLS	Q9HDD0	168 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	CCL28	Q9NRJ3	127 aa		13.48	□□□□□ -0.25
GGA1-223	ENST00000491295	TMEM213	A2RRL7	107 aa		13.47	□□□□□ -0.25
GGA1-223	ENST00000491295	CLEC3B	P05452	202 aa		13.47	□□□□□ -0.25
GGA1-223	ENST00000491295	CBX5	P45973	191 aa		13.47	□□□□□ -0.25
GGA1-223	ENST00000491295	ELL	P55199	621 aa	Predicted RBP	13.47	□□□□□ -0.25
GGA1-223	ENST00000491295	THOC7	Q6I9Y2	204 aa	Known RBP	13.47	□□□□□ -0.25
GGA1-223	ENST00000491295	UXS1	Q8NBZ7	420 aa		13.47	□□□□□ -0.25
GGA1-223	ENST00000491295	COMMD5	Q9GZQ3	224 aa		13.47	□□□□□ -0.25
GGA1-223	ENST00000491295	SLC5A7	Q9GZV3	580 aa		13.47	□□□□□ -0.25
GGA1-223	ENST00000491295	PLEKHA2	Q9HB19	425 aa		13.47	□□□□□ -0.25
GGA1-223	ENST00000491295	TNFSF12	O43508	249 aa		13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	OR2B8P	P59922	312 aa		13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	TMEM61	Q8N0U2	210 aa		13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	GVQW1	Q8N7I0	195 aa		13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	OR5AP2	Q8NGF4	316 aa		13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	OR52B4	Q8NGK2	314 aa		13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	SLC25A38	Q96DW6	304 aa		13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	AUNIP	Q9H7T9	357 aa		13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	RETN	Q9HD89	108 aa		13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	MRPL27	Q9P0M9	148 aa	Known RBP	13.46	□□□□□ -0.25
GGA1-223	ENST00000491295	CGB1	A6NKQ9	187 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	SULT1C2	O00338	296 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	UPK2	O00526	184 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	IGHV3-23	P01764	117 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	C8orf88	P0DMB2	117 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	PTBP1	P26599	531 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	MXD1	Q05195	221 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	IDNK	Q5T6J7	187 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	ZNF773	Q6PK81	442 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	C19orf35	Q6ZS72	473 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	CADM3	Q8N126	398 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	OR5H6	Q8NGV6	325 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	GPHA2	Q96T91	129 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	MLX	Q9UH92	298 aa		13.45	□□□□□ -0.26
GGA1-223	ENST00000491295	IGLC7	A0M8Q6	106 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	MYOD1	P15172	320 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	EDN2	P20800	178 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	PLET1	Q6UQ28	207 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	CROCCP3	Q8IVE0	287 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	ZNF502	Q8TBZ5	544 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	VN1R17P	Q8TDU5	208 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	CACNG8	Q8WXS5	425 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	ATP6V0B	Q99437	205 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	FAM110A	Q9BQ89	295 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	GGTLC1	Q9BX51	225 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	WFDC10A	Q9H1F0	79 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	COMMD9	Q9P000	198 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	UFC1	Q9Y3C8	167 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295		S4R3C0	116 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	STARD9	Q9P2P6	4700 aa		13.44	□□□□□ -0.26
GGA1-223	ENST00000491295	RYR2	Q92736	4967 aa		13.43	□□□□□ -0.26
GGA1-223	ENST00000491295	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.43	□□□□□ -0.26
GGA1-223	ENST00000491295	MFSD2B	A6NFX1	497 aa		13.43	□□□□□ -0.26
GGA1-223	ENST00000491295	REG1A	P05451	166 aa		13.43	□□□□□ -0.26
GGA1-223	ENST00000491295	DHRS11	Q6UWP2	260 aa		13.43	□□□□□ -0.26
GGA1-223	ENST00000491295	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.43	□□□□□ -0.26
GGA1-223	ENST00000491295	DMBX1	Q8NFW5	382 aa		13.43	□□□□□ -0.26
GGA1-223	ENST00000491295	QTRT1	Q9BXR0	403 aa	Known RBP	13.43	□□□□□ -0.26
GGA1-223	ENST00000491295	SACS	Q9NZJ4	4579 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	LOC100506127	A0A0U1RQW1	187 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	XRCC3	O43542	346 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	CLEC2L	P0C7M8	214 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	PTHLH	P12272	177 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	FXYD4	P59646	89 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	HERV-K104	P61576	105 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	TM4SF20	Q53R12	229 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	ZNF818P	Q6ZRF7	136 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	S100A16	Q96FQ6	103 aa	Known RBP	13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	C5orf66	Q9H5L9	145 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	TMEM140	Q9NV12	185 aa		13.42	□□□□□ -0.26
GGA1-223	ENST00000491295	SCAF4	O95104	1147 aa	Known RBP	13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	ATP6V1G2	O95670	118 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	TRAPPC2	P0DI81	140 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	TRAPPC2B	P0DI82	140 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	GNRHR	P30968	328 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	GPR183	P32249	361 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	ERVK-16	P61578	105 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	ZNF585B	Q52M93	769 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms