RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 HSPB1P04792 205 aaKnown RBP13.43□□□□□ -0.26
MDC1-206ENST00000489540 ZNF735P0CB33 412 aa13.43□□□□□ -0.26
MDC1-206ENST00000489540 PTBP1P26599 531 aaKnown RBP eCLIP13.43□□□□□ -0.26
MDC1-206ENST00000489540 THAP7Q9BT49 309 aaPredicted RBP13.43□□□□□ -0.26
MDC1-206ENST00000489540 COMMD5Q9GZQ3 224 aa13.43□□□□□ -0.26
MDC1-206ENST00000489540 NOTCH1P46531 2555 aa13.43□□□□□ -0.26
MDC1-206ENST00000489540 ANKRD20A5PA0PJZ0 165 aa13.42□□□□□ -0.26
MDC1-206ENST00000489540 DPPA5A6NC42 116 aa13.42□□□□□ -0.26
MDC1-206ENST00000489540 HMX3A6NHT5 357 aa13.42□□□□□ -0.26
MDC1-206ENST00000489540 E7EUB6 86 aa13.42□□□□□ -0.26
MDC1-206ENST00000489540 LINC01619G3V211 115 aa13.42□□□□□ -0.26
MDC1-206ENST00000489540 KRASP01116 189 aa13.42□□□□□ -0.26
MDC1-206ENST00000489540 PIGPP57054 158 aa13.42□□□□□ -0.26
MDC1-206ENST00000489540 SRSF8Q9BRL6 282 aaKnown RBP13.42□□□□□ -0.26
MDC1-206ENST00000489540 ALX4Q9H161 411 aaPredicted RBP13.42□□□□□ -0.26
MDC1-206ENST00000489540 COPZ2Q9P299 210 aa13.42□□□□□ -0.26
MDC1-206ENST00000489540 ZNF257Q9Y2Q1 563 aa13.42□□□□□ -0.26
MDC1-206ENST00000489540 TNCP24821 2201 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 TRAV3A0A0B4J244 114 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 NPIPB5A8MRT5 1133 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 SNAPC5O75971 98 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 SERPINE2P07093 398 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 CTSDP07339 412 aaPredicted RBP13.41□□□□□ -0.26
MDC1-206ENST00000489540 RPA2P15927 270 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 PI3P19957 117 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 G6PCP35575 357 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 PPP5CP53041 499 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 SURF2Q15527 256 aaPredicted RBP13.41□□□□□ -0.26
MDC1-206ENST00000489540 PYDC2Q56P42 97 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 FOXB2Q5VYV0 432 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 CCDC190Q86UF4 302 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 CCDC71LQ8N9Z2 235 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 OR4C16Q8NGL9 310 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 PRRT1Q99946 306 aa13.41□□□□□ -0.26
MDC1-206ENST00000489540 RANGRFQ9HD47 186 aaPredicted RBP13.41□□□□□ -0.26
MDC1-206ENST00000489540 TRBV9A0A0B4J1U6 114 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 FAM223BA6NKX1 122 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 B3GALNT1O75752 331 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 DHFRP00374 187 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 CRYGCP07315 174 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 OR2B8PP59922 312 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 THOC7Q6I9Y2 204 aaKnown RBP13.4□□□□□ -0.26
MDC1-206ENST00000489540 FAAP20Q6NZ36 180 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 REC114Q7Z4M0 266 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 FAM223AQ8IWN6 122 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 OR13C8Q8NGS7 320 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 MARCH1Q8TCQ1 289 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 TSC22D3Q99576 134 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 FKBP11Q9NYL4 201 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 ZMAT5Q9UDW3 170 aaKnown RBP13.4□□□□□ -0.26
MDC1-206ENST00000489540 SCP2D1Q9UJQ7 156 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 V9GYH0 126 aa13.4□□□□□ -0.26
MDC1-206ENST00000489540 A0A1B0GW64 132 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 H0Y980 276 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 PSMB6P28072 239 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 ETV6P41212 452 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 AP3S2P59780 193 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 RHOGP84095 191 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 ATP5G2Q06055 141 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 PDLIM3Q53GG5 364 aaPredicted RBP13.39□□□□□ -0.27
MDC1-206ENST00000489540 SPANXN2Q5MJ10 180 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 Q8N402 240 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 NECAP1Q8NC96 275 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 QTRT1Q9BXR0 403 aaKnown RBP13.39□□□□□ -0.27
MDC1-206ENST00000489540 SLC2A8Q9NY64 477 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 PRNDQ9UKY0 176 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 C14orf166Q9Y224 244 aaKnown RBP13.39□□□□□ -0.27
MDC1-206ENST00000489540 IGHV4OR15-8A0A075B7B6 117 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 A0A087WW49 117 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 C3orf85A0A1B0GTC6 90 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 TEX50A0A1B0GTY4 177 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 CGB1A6NKQ9 187 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 ATG12O94817 140 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 PRH1P02810 166 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 MYOD1P15172 320 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 ZNF45Q02386 682 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 C9orf66Q5T8R8 295 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 ZNF343Q6P1L6 599 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 H2BFWTQ7Z2G1 175 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 HSD17B13Q7Z5P4 300 aaPredicted RBP13.39□□□□□ -0.27
MDC1-206ENST00000489540 OR51S1Q8NGJ8 323 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 OR1L8Q8NGR8 309 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 DCUN1D4Q92564 292 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 MRGPRFQ96AM1 343 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 SEC22AQ96IW7 307 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 SCGB3A2Q96PL1 93 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 AKIP1Q9NQ31 210 aa13.39□□□□□ -0.27
MDC1-206ENST00000489540 MEGF8Q7Z7M0 2845 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 SEC14L6B5MCN3 397 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 WIPF1O43516 503 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 AREGP15514 252 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
MDC1-206ENST00000489540 CTRB1P17538 263 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 ZP3P21754 424 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 FAUP35544 74 aaKnown RBP13.38□□□□□ -0.27
MDC1-206ENST00000489540 EGFEM1PQ0D2K5 195 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 FAM209BQ5JX69 171 aa13.38□□□□□ -0.27
MDC1-206ENST00000489540 CTRB2Q6GPI1 263 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms