RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ZNF705DP0CH99 300 aaPredicted RBP1.99□□□□□ -2.09
XRN1-213ENST00000489241 CSRP1P21291 193 aaKnown RBP1.99□□□□□ -2.09
XRN1-213ENST00000489241 CSN1S1P47710 185 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 RPS20P60866 119 aaKnown RBP1.99□□□□□ -2.09
XRN1-213ENST00000489241 MEF2BQ02080 365 aaPredicted RBP1.99□□□□□ -2.09
XRN1-213ENST00000489241 CDK10Q15131 360 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 SPA17Q15506 151 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 LHFPL1Q86WI0 220 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 ANKRD29Q8N6D5 301 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 OR8B12Q8NGG6 310 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 OR4X1Q8NH49 305 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 WDR61Q9GZS3 305 aaKnown RBP1.99□□□□□ -2.09
XRN1-213ENST00000489241 XAGE1AQ9HD64 81 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 IDI2-AS1Q9NZ38 188 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 FUT9Q9Y231 359 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 PLXNB1O43157 2135 aa1.99□□□□□ -2.09
XRN1-213ENST00000489241 TRAV26-2A0A0B4J265 109 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 C2orf74A8MZ97 194 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 LEPROTO15243 131 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 ALDH3A1P30838 453 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 CCR2P41597 374 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 DEFA1P59665 94 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 AP1S1P61966 158 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 AKR1C1Q04828 323 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 ZNF181Q2M3W8 571 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 AGTRAPQ6RW13 159 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 Q6ZS52 159 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 S100A7AQ86SG5 101 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 MRPL30Q8TCC3 161 aaKnown RBP1.98□□□□□ -2.09
XRN1-213ENST00000489241 TSPAN32Q96QS1 320 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 IMMP2LQ96T52 175 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 Q9BRP9 147 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 TRIM4Q9C037 500 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 OR8D2Q9GZM6 311 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 EFCAB1Q9HAE3 211 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 PRTFDC1Q9NRG1 225 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 DOK5Q9P104 306 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 RSL24D1Q9UHA3 163 aaKnown RBP1.98□□□□□ -2.09
XRN1-213ENST00000489241 TRPM6Q9BX84 2022 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 HECW2Q9P2P5 1572 aa1.98□□□□□ -2.09
XRN1-213ENST00000489241 ATG2BQ96BY7 2078 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 A0A0J9YW62 118 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 ZNF878C9JN71 531 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 FNDC10F2Z333 226 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 SERPINA1P01009 418 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 HIST1H3AP68431 136 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 H3F3AP84243 136 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 HES1Q14469 280 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 TMED2Q15363 201 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 IAH1Q2TAA2 248 aaPredicted RBP1.97□□□□□ -2.09
XRN1-213ENST00000489241 OR51T1Q8NGJ9 327 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 BORCS7Q96B45 105 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 KLF6Q99612 283 aaPredicted RBP1.97□□□□□ -2.09
XRN1-213ENST00000489241 ARL2BPQ9Y2Y0 163 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 NCOA1Q15788 1441 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 NUP155O75694 1391 aa1.97□□□□□ -2.09
XRN1-213ENST00000489241 IGKV1D-43A0A0B4J1Z2 117 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 H3BT86 120 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 SERPINA7P05543 415 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 HLA-DMBP28068 263 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 CCL20P78556 96 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 SLC35E3Q7Z769 313 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 ZNF676Q8N7Q3 588 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 OR5J2Q8NH18 312 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 DNAJC30Q96LL9 226 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 SIGMAR1Q99720 223 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 CMSS1Q9BQ75 279 aaKnown RBP1.96□□□□□ -2.1
XRN1-213ENST00000489241 TMEM147Q9BVK8 224 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 COMMD5Q9GZQ3 224 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 C14orf105Q9NVL8 296 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 FBXL12Q9NXK8 326 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 IL36BQ9NZH7 164 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 TP73-AS1Q9UF72 201 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 HHLA3Q9XRX5 114 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 PIK3C2GO75747 1445 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 PCF11O94913 1555 aaKnown RBP1.96□□□□□ -2.1
XRN1-213ENST00000489241 ROBO3Q96MS0 1386 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 ADGRB3O60242 1522 aa1.96□□□□□ -2.1
XRN1-213ENST00000489241 TRIOBPQ9H2D6 2365 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 TRGV4A0A0C4DH28 118 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 hADV38S2A0JD32 116 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 NOS1APO75052 506 aaPredicted RBP1.95□□□□□ -2.1
XRN1-213ENST00000489241 IGKV1-5P01602 117 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 CST2P09228 141 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 LGALS1P09382 135 aaKnown RBP1.95□□□□□ -2.1
XRN1-213ENST00000489241 RPL28P46779 137 aaKnown RBP1.95□□□□□ -2.1
XRN1-213ENST00000489241 TPI1P60174 286 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 RAB14P61106 215 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 ARF6P62330 175 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 ZNF90Q03938 601 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 PABPC1L2AQ5JQF8 200 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 OR10X1Q8NGY0 326 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 MRPS24Q96EL2 167 aaKnown RBP1.95□□□□□ -2.1
XRN1-213ENST00000489241 NIPSNAP1Q9BPW8 284 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 RNASE7Q9H1E1 156 aaKnown RBP1.95□□□□□ -2.1
XRN1-213ENST00000489241 C11orf68Q9H3H3 251 aaKnown RBP1.95□□□□□ -2.1
XRN1-213ENST00000489241 IL20Q9NYY1 176 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 PRO2289Q9P1D8 64 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 TIMM22Q9Y584 194 aa1.95□□□□□ -2.1
XRN1-213ENST00000489241 TMEM56-RWDD3S4R434 201 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms