RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ST8SIA3O43173 380 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 HLA-DRB1P01911 266 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 NKX2-1P43699 371 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-208ENST00000488989 OR2B8PP59922 312 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 HSPE1P61604 102 aaKnown RBP12.73□□□□□ -0.37
CLDN11-208ENST00000488989 SSBP2P81877 361 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-208ENST00000488989 PJVKQ0ZLH3 352 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 LY6EQ16553 131 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 CXorf66Q5JRM2 361 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-208ENST00000488989 TMEM219Q86XT9 240 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 C5orf56Q8N8D9 126 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 OR5B3Q8NH48 314 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 PPP1R1CQ8WVI7 109 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 QTRT1Q9BXR0 403 aaKnown RBP12.73□□□□□ -0.37
CLDN11-208ENST00000488989 ZFP57Q9NU63 452 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 VPREB3Q9UKI3 123 aa12.73□□□□□ -0.37
CLDN11-208ENST00000488989 FN1P02751 2386 aaKnown RBP12.72□□□□□ -0.37
CLDN11-208ENST00000488989 G3V3Q6 166 aa12.72□□□□□ -0.37
CLDN11-208ENST00000488989 M0QZK8 103 aa12.72□□□□□ -0.37
CLDN11-208ENST00000488989 FCN1O00602 326 aa12.72□□□□□ -0.37
CLDN11-208ENST00000488989 HOXA3O43365 443 aaPredicted RBP12.72□□□□□ -0.37
CLDN11-208ENST00000488989 MBPP02686 304 aaPredicted RBP12.72□□□□□ -0.37
CLDN11-208ENST00000488989 AMY1AP04745 511 aa12.72□□□□□ -0.37
CLDN11-208ENST00000488989 SPCS3P61009 180 aa12.72□□□□□ -0.37
CLDN11-208ENST00000488989 TNFRSF9Q07011 255 aa12.72□□□□□ -0.37
CLDN11-208ENST00000488989 RAB32Q13637 225 aa12.72□□□□□ -0.37
CLDN11-208ENST00000488989 Q71RC1 249 aaPredicted RBP12.72□□□□□ -0.37
CLDN11-208ENST00000488989 OR51B2Q9Y5P1 312 aa12.72□□□□□ -0.37
CLDN11-208ENST00000488989 TEX50A0A1B0GTY4 177 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 K7EPK0 472 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 CHST1O43916 411 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 RBMXL2O75526 392 aaKnown RBP12.71□□□□□ -0.37
CLDN11-208ENST00000488989 MPC2O95563 127 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 PSMB6P28072 239 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 COMPP49747 757 aaPredicted RBP12.71□□□□□ -0.37
CLDN11-208ENST00000488989 FGL1Q08830 312 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 PLGLAQ15195 96 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 ZNF562Q6V9R5 426 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 OR1L8Q8NGR8 309 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 OR2T35Q8NGX2 323 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 RASL11BQ9BPW5 248 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 C11orf1Q9H5F2 150 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 NDUFA4L2Q9NRX3 87 aa12.71□□□□□ -0.37
CLDN11-208ENST00000488989 RCL1Q9Y2P8 373 aaKnown RBP12.71□□□□□ -0.37
CLDN11-208ENST00000488989 TRAV14DV4A0A0A6YYC5 116 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 CGB1A6NKQ9 187 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 INS-IGF2F8WCM5 200 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 H0YIZ8 118 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 CLDN34H7C241 214 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 CRLF1O75462 422 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 MED6O75586 246 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 CA2P00918 260 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 FAM157CP0CG43 387 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 LYL1P12980 280 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 MYOD1P15172 320 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 POLR2GP62487 172 aaKnown RBP eCLIP12.7□□□□□ -0.38
CLDN11-208ENST00000488989 PRCDQ00LT1 54 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 CD300CQ08708 224 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 Q5BKY6 102 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 RBMS3Q6XE24 437 aaKnown RBP12.7□□□□□ -0.38
CLDN11-208ENST00000488989 COMMD5Q9GZQ3 224 aa12.7□□□□□ -0.38
CLDN11-208ENST00000488989 IGHV7-81A0A0B4J1V7 117 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 A0A1B0GW64 132 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 E7EUB6 86 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 SYNGR2O43760 224 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 PFDN1O60925 122 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 DEDDO75618 318 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 ACTL6BO94805 426 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 SCGB1D2O95969 90 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 IFNA17P01571 189 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 RPL27AP46776 148 aaKnown RBP12.69□□□□□ -0.38
CLDN11-208ENST00000488989 CX3CL1P78423 397 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 TNXAQ16473 311 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 CLCC1Q96S66 551 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 RNF126Q9BV68 326 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 RBKSQ9H477 322 aa12.69□□□□□ -0.38
CLDN11-208ENST00000488989 NXPH3O95157 252 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 LY86O95711 162 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 PET100P0DJ07 73 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 SLC25A4P12235 298 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 VDAC2P45880 294 aaPredicted RBP12.68□□□□□ -0.38
CLDN11-208ENST00000488989 C10orf55Q5SWW7 151 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 C11orf87Q6NUJ2 197 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 PRSS54Q6PEW0 395 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 ZNF418Q8TF45 676 aaPredicted RBP12.68□□□□□ -0.38
CLDN11-208ENST00000488989 SRSF12Q8WXF0 261 aaKnown RBP12.68□□□□□ -0.38
CLDN11-208ENST00000488989 RAB40CQ96S21 281 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 SRSF8Q9BRL6 282 aaKnown RBP12.68□□□□□ -0.38
CLDN11-208ENST00000488989 MAGT1Q9H0U3 335 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 ESM1Q9NQ30 184 aa12.68□□□□□ -0.38
CLDN11-208ENST00000488989 LSM5Q9Y4Y9 91 aaKnown RBP12.68□□□□□ -0.38
CLDN11-208ENST00000488989 A0A1W2PN81 502 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 DNAJC9-AS1A6NH13 148 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 TEX22C9J3V5 150 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 SMLR1H3BR10 107 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 WRBO00258 174 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 C1QBP02746 253 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 RLN2P04090 185 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 CHRNA7P36544 502 aa12.67□□□□□ -0.38
CLDN11-208ENST00000488989 PAX9P55771 341 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms