RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 MGST3O14880 152 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 HPRT1P00492 218 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 MBP02144 154 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 IGKV1-16P04430 117 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 RELBQ01201 579 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 C17orf58Q2M2W7 97 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 LHFPL4Q7Z7J7 247 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 OR10A7Q8NGE5 316 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 MBD3L2Q8NHZ7 208 aaPredicted RBP10.43□□□□□ -0.74
CLIC4-202ENST00000488683 PACRGQ96M98 296 aaPredicted RBP10.43□□□□□ -0.74
CLIC4-202ENST00000488683 RBFOX2O43251 390 aaKnown RBP eCLIP10.43□□□□□ -0.741e-6■■■■□ 23.3
CLIC4-202ENST00000488683 YPEL1O60688 119 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 AARDQ4LEZ3 155 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 YPEL2Q96QA6 119 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 S1PR3Q99500 378 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 CTDSP1Q9GZU7 261 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 PRDM13Q9H4Q3 707 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 A0A1W2PPV4 95 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 PRSS46E5RG02 174 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 GFRA3O60609 400 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 CD33P20138 364 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 VDAC2P45880 294 aaPredicted RBP10.42□□□□□ -0.74
CLIC4-202ENST00000488683 ARSJQ5FYB0 599 aaPredicted RBP10.42□□□□□ -0.74
CLIC4-202ENST00000488683 PRR31Q5SQ13 230 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 TRAT1Q6PIZ9 186 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 MANBALQ9NQG1 85 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 TLN1Q9Y490 2541 aaKnown RBP10.42□□□□□ -0.74
CLIC4-202ENST00000488683 XKRY2A2RUG3 117 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 CR1LQ2VPA4 569 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 TCF19Q9Y242 345 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 YTHDF2Q9Y5A9 579 aaKnown RBP10.42□□□□□ -0.74
CLIC4-202ENST00000488683 PXMP4Q9Y6I8 212 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 VPS13CQ709C8 3753 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 CUL9Q8IWT3 2517 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 MUC6Q6W4X9 2439 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 F2RL2O00254 374 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 LHBP01229 141 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 PRB4P10163 310 aaPredicted RBP10.42□□□□□ -0.74
CLIC4-202ENST00000488683 KLF3P57682 345 aaPredicted RBP10.42□□□□□ -0.74
CLIC4-202ENST00000488683 FAM216AQ8WUB2 273 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 DDB2Q92466 427 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 NEIL1Q96FI4 390 aaPredicted RBP10.42□□□□□ -0.74
CLIC4-202ENST00000488683 DIRC2Q96SL1 478 aa10.42□□□□□ -0.74
CLIC4-202ENST00000488683 SRRM4A7MD48 611 aaKnown RBP10.41□□□□□ -0.74
CLIC4-202ENST00000488683 C17orf112F2Z3M2 114 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 SLC17A3O00476 420 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 SPINK4O60575 86 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 CEACAM4O75871 244 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 CGB3P0DN86 165 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 CGB7P0DN87 165 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 IGFBP2P18065 325 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 CFHR2P36980 270 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 SPCS3P61009 180 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 DIAPH2-AS1Q14236 149 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 ACOT6Q3I5F7 207 aaPredicted RBP10.41□□□□□ -0.74
CLIC4-202ENST00000488683 PDLIM3Q53GG5 364 aaPredicted RBP10.41□□□□□ -0.74
CLIC4-202ENST00000488683 OR4A47Q6IF82 309 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 OR10W1Q8NGF6 305 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 GGTLC1Q9BX51 225 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 CA2P00918 260 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 PYGO2Q9BRQ0 406 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 GCM1Q9NP62 436 aa10.41□□□□□ -0.74
CLIC4-202ENST00000488683 PPP5D1E7EU14 171 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 NUPR1O60356 82 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 AMBPP02760 352 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 APELAP0DMC3 54 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 MZT1Q08AG7 82 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 HLA-DRB5Q30154 266 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 LINC01551Q86U37 167 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 FAM169BQ8N8A8 192 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 OR5B12Q96R08 314 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 IMMP2LQ96T52 175 aa10.4□□□□□ -0.74
CLIC4-202ENST00000488683 ZNF705GA8MUZ8 300 aaPredicted RBP10.4□□□□□ -0.75
CLIC4-202ENST00000488683 TMPRSS2O15393 492 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 CCL3L1P16619 93 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 NDUFB7P17568 137 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 GLRXP35754 106 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 LGALS4P56470 323 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 ERVK-16P61578 105 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 OR5I1Q13606 314 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 TIMM23BQ5SRD1 257 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 LURAP1LQ8IV03 231 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 SRD5A3Q9H8P0 318 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 SPTA1P02549 2419 aa10.4□□□□□ -0.75
CLIC4-202ENST00000488683 ABCA4P78363 2273 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 GRIFINA4D1Z8 144 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 ZADH2Q8N4Q0 377 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 LRFN3Q9BTN0 628 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 CELSR1Q9NYQ6 3014 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 ATRXP46100 2492 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 IGLV3-9A0A075B6K5 115 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 ELOA3CA0A087WX78 387 aaPredicted RBP10.39□□□□□ -0.75
CLIC4-202ENST00000488683 ZNF320A2RRD8 509 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 FCN3O75636 299 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 IGHV1-46P01743 117 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 IL6RP08887 468 aaPredicted RBP10.39□□□□□ -0.75
CLIC4-202ENST00000488683 OR10J4P0C629 311 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 SLC35B1P78383 322 aa10.39□□□□□ -0.75
CLIC4-202ENST00000488683 TNFAIP6P98066 277 aaPredicted RBP10.39□□□□□ -0.75
CLIC4-202ENST00000488683 TMEM256Q8N2U0 113 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms