RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 ZNF486Q96H40 463 aaPredicted RBP9.51□□□□□ -0.89
SFXN3-206ENST00000487721 RAX2Q96IS3 184 aa9.51□□□□□ -0.89
SFXN3-206ENST00000487721 MS4A10Q96PG2 267 aa9.51□□□□□ -0.89
SFXN3-206ENST00000487721 PLEKHA2Q9HB19 425 aa9.51□□□□□ -0.89
SFXN3-206ENST00000487721 COMMD9Q9P000 198 aa9.51□□□□□ -0.89
SFXN3-206ENST00000487721 ZMAT5Q9UDW3 170 aaKnown RBP9.51□□□□□ -0.89
SFXN3-206ENST00000487721 PRKDCP78527 4128 aaKnown RBP9.51□□□□□ -0.89
SFXN3-206ENST00000487721 TNCP24821 2201 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 PLA2G10O15496 165 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 LYRM1O43325 122 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 RAMP3O60896 148 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 PRB2P02812 416 aaPredicted RBP9.5□□□□□ -0.89
SFXN3-206ENST00000487721 CTSDP07339 412 aaPredicted RBP9.5□□□□□ -0.89
SFXN3-206ENST00000487721 OR8U8P0C7N1 319 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 IGLL1P15814 213 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 PI3P19957 117 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 RPL8P62917 257 aaKnown RBP9.5□□□□□ -0.89
SFXN3-206ENST00000487721 RUNX1Q01196 453 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 SURF2Q15527 256 aaPredicted RBP9.5□□□□□ -0.89
SFXN3-206ENST00000487721 PUSL1Q8N0Z8 303 aaKnown RBP9.5□□□□□ -0.89
SFXN3-206ENST00000487721 OR11H1Q8NG94 326 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 OR1N2Q8NGR9 330 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 TMEM167AQ8TBQ9 72 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 P2RX4Q99571 388 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 SLC2A9Q9NRM0 540 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 COA4Q9NYJ1 87 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 BET1LQ9NYM9 111 aa9.5□□□□□ -0.89
SFXN3-206ENST00000487721 C14orf166Q9Y224 244 aaKnown RBP9.5□□□□□ -0.89
SFXN3-206ENST00000487721 SOX15O60248 233 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 BRI3O95415 125 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 DHFRP00374 187 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 OR9G9P0C7N8 305 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 BTCP35070 178 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 RPL27AP46776 148 aaKnown RBP9.49□□□□□ -0.89
SFXN3-206ENST00000487721 CCR6P51684 374 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 PIGPP57054 158 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 BRWD1-AS2P59051 145 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 RND3P61587 244 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 ZNF616Q08AN1 781 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 RBMS2Q15434 407 aaKnown RBP9.49□□□□□ -0.89
SFXN3-206ENST00000487721 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 OXLD1Q5BKU9 147 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 KPRPQ5T749 579 aaPredicted RBP9.49□□□□□ -0.89
SFXN3-206ENST00000487721 OR4A47Q6IF82 309 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 ETV3LQ6ZN32 361 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 TBC1D26Q86UD7 250 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 CCDC71LQ8N9Z2 235 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 CASTOR1Q8WTX7 329 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 SCGB3A2Q96PL1 93 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 OR5B12Q96R08 314 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 COMMD5Q9GZQ3 224 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 GNB4Q9HAV0 340 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 FAM212BQ9NTI7 297 aaPredicted RBP9.49□□□□□ -0.89
SFXN3-206ENST00000487721 COPZ2Q9P299 210 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 TBC1D24Q9ULP9 559 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 GPR132Q9UNW8 380 aa9.49□□□□□ -0.89
SFXN3-206ENST00000487721 I3L521 148 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 SERPINE2P07093 398 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 LGALS1P09382 135 aaKnown RBP9.48□□□□□ -0.89
SFXN3-206ENST00000487721 APELAP0DMC3 54 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 HLA-GP17693 338 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 LPAR6P43657 344 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 SSBP2P81877 361 aaPredicted RBP9.48□□□□□ -0.89
SFXN3-206ENST00000487721 IFITM3Q01628 133 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 ASAH1Q13510 395 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 KIAA0141Q14154 515 aaPredicted RBP9.48□□□□□ -0.89
SFXN3-206ENST00000487721 POU2AF1Q16633 256 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 REC114Q7Z4M0 266 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 USMG5Q96IX5 58 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 DUX3Q96PT4 197 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 FYTTD1Q96QD9 318 aaKnown RBP9.48□□□□□ -0.89
SFXN3-206ENST00000487721 SLC25A21Q9BQT8 299 aaPredicted RBP9.48□□□□□ -0.89
SFXN3-206ENST00000487721 C5orf66Q9H5L9 145 aa9.48□□□□□ -0.89
SFXN3-206ENST00000487721 MARCH11A6NNE9 402 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 LINC01619G3V211 115 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 UPK2O00526 184 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 SNAPC5O75971 98 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 ATG12O94817 140 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 S1PR2O95136 353 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 HSPB1P04792 205 aaKnown RBP9.47□□□□□ -0.89
SFXN3-206ENST00000487721 FGF2P09038 288 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 MRGPRG-AS1Q2M3A8 158 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 MZT2BQ6NZ67 158 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 TTC9CQ8N5M4 171 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 RTBDNQ9BSG5 229 aaPredicted RBP9.47□□□□□ -0.89
SFXN3-206ENST00000487721 TMEM140Q9NV12 185 aa9.47□□□□□ -0.89
SFXN3-206ENST00000487721 FAM223BA6NKX1 122 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 CYB5BO43169 146 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 NDUFB6O95139 128 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 KRASP01116 189 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 RPA2P15927 270 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 ATP5G2Q06055 141 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 FHL3Q13643 280 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 FAM209BQ5JX69 171 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 ASPHD1Q5U4P2 390 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 THOC7Q6I9Y2 204 aaKnown RBP9.46□□□□□ -0.9
SFXN3-206ENST00000487721 TMED4Q7Z7H5 227 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 FAM223AQ8IWN6 122 aa9.46□□□□□ -0.9
SFXN3-206ENST00000487721 CADM3Q8N126 398 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms