RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	LHFPL5	Q8TAF8	219 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	VSTM2A	Q8TAG5	236 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	ZNF418	Q8TF45	676 aa	Predicted RBP	6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	TMEM56	Q96MV1	263 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	ZNF48	Q96MX3	618 aa	Predicted RBP	6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	SPIN2A	Q99865	258 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	SPIN2B	Q9BPZ2	258 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	MED28	Q9H204	178 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	TMEM140	Q9NV12	185 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	SHPK	Q9UHJ6	478 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	VPREB3	Q9UKI3	123 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	MOB4	Q9Y3A3	225 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565	TMEM56-RWDD3	S4R434	201 aa		6.11	□□□□□ -1.43
GARNL3-218	ENST00000487565		A6NDX4	124 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	DNAJC9-AS1	A6NH13	148 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	FAM90A9P	A6NNJ1	464 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	NCBP2L	A6PVI3	153 aa	Known RBP	6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	FAM25E	A8MYX2	175 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565		M0QZK8	103 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	CCS	O14618	274 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	RRH	O14718	337 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	HOXA3	O43365	443 aa	Predicted RBP	6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	KBTBD11	O94819	623 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	OR2F2	O95006	317 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	IGKV1-39	P01597	117 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	IGKV1-5	P01602	117 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	IGKV1D-39	P04432	117 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	HOXB5	P09067	269 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	FAM157C	P0CG43	387 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	VDAC1	P21796	283 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	IER3	P46695	156 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	UBE2K	P61086	200 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	EBI3	Q14213	229 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	PSG5	Q15238	335 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	POU2AF1	Q16633	256 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	OR4A47	Q6IF82	309 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565		Q6YL49	198 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	H2BFWT	Q7Z2G1	175 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	C16orf82	Q7Z2V1	217 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	LYZL2	Q7Z4W2	148 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	TMEM219	Q86XT9	240 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	FAM219A	Q8IW50	185 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	VKORC1L1	Q8N0U8	176 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	TMEM86B	Q8N661	226 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565		Q8N6K4	173 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	RBMXL1	Q96E39	390 aa	Known RBP	6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	SEC22A	Q96IW7	307 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	RNF5	Q99942	180 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	SLC25A33	Q9BSK2	321 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	PRDM13	Q9H4Q3	707 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	RAB18	Q9NP72	206 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	TNFRSF19	Q9NS68	423 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	C1RL	Q9NZP8	487 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	MGAT4C	Q9UBM8	478 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	METTL1	Q9UBP6	276 aa	Known RBP	6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	TMED3	Q9Y3Q3	217 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	MMP24	Q9Y5R2	645 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	POMT1	Q9Y6A1	747 aa		6.1	□□□□□ -1.43
GARNL3-218	ENST00000487565	CRLF1	O75462	422 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	RBMXL2	O75526	392 aa	Known RBP	6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	ADAP1	O75689	374 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	SNAPC5	O75971	98 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	OR2A4	O95047	310 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	NDUFA3	O95167	84 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	LY86	O95711	162 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	IGLV2-23	P01705	113 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	SULT1A3	P0DMM9	295 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	SULT1A4	P0DMN0	295 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	CNTFR	P26992	372 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	OR2B8P	P59922	312 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	RRAS2	P62070	204 aa	Predicted RBP	6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	C5orf64	Q2M2E5	130 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	IAH1	Q2TAA2	248 aa	Predicted RBP	6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	NMS	Q5H8A3	153 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	GGNBP1	Q5YKI7	109 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	TEX45	Q8NA69	505 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	NPB	Q8NG41	125 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	OR5M8	Q8NGP6	311 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	OR4A5	Q8NH83	315 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	PIFO	Q8TCI5	191 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	ST8SIA2	Q92186	375 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	LSM10	Q969L4	123 aa	Known RBP	6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	RBM14	Q96PK6	669 aa	Known RBP	6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	OR2A7	Q96R45	310 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	PDCD10	Q9BUL8	212 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	FBXL15	Q9H469	300 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	BET1L	Q9NYM9	111 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	CACNG5	Q9UF02	275 aa		6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	FN1	P02751	2386 aa	Known RBP	6.09	□□□□□ -1.43
GARNL3-218	ENST00000487565	TEP1	Q99973	2627 aa	Known RBP	6.09	□□□□□ -1.44
GARNL3-218	ENST00000487565	MXRA5	Q9NR99	2828 aa		6.08	□□□□□ -1.44
GARNL3-218	ENST00000487565		A0A0G2JRQ6	117 aa		6.08	□□□□□ -1.44
GARNL3-218	ENST00000487565		A0A1B0GU03	582 aa		6.08	□□□□□ -1.44
GARNL3-218	ENST00000487565	C13orf42	A0A1B0GVH6	325 aa		6.08	□□□□□ -1.44
GARNL3-218	ENST00000487565	C5orf51	A6NDU8	294 aa		6.08	□□□□□ -1.44
GARNL3-218	ENST00000487565	C15orf61	A6NNL5	157 aa		6.08	□□□□□ -1.44
GARNL3-218	ENST00000487565	SRRM4	A7MD48	611 aa	Known RBP	6.08	□□□□□ -1.44
GARNL3-218	ENST00000487565	FGF16	O43320	207 aa		6.08	□□□□□ -1.44
GARNL3-218	ENST00000487565	CHST1	O43916	411 aa		6.08	□□□□□ -1.44
GARNL3-218	ENST00000487565	GPR137B	O60478	399 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms