RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 GCSAMLQ5JQS6 135 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 WFDC8Q8IUA0 241 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 ZNF383Q8NA42 475 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 ZNF439Q8NDP4 499 aa21.45■■□□□ 1.02
HLA-C-208ENST00000487245 SAA2-SAA4A0A096LPE2 208 aa21.44■■□□□ 1.02
HLA-C-208ENST00000487245 TRAV3A0A0B4J244 114 aa21.44■■□□□ 1.02
HLA-C-208ENST00000487245 VSTM5A8MXK1 200 aa21.44■■□□□ 1.02
HLA-C-208ENST00000487245 IGHV3-7P01780 117 aa21.44■■□□□ 1.02
HLA-C-208ENST00000487245 SAA2P0DJI9 122 aaPredicted RBP21.44■■□□□ 1.02
HLA-C-208ENST00000487245 OR2T10Q8NGZ9 312 aa21.44■■□□□ 1.02
HLA-C-208ENST00000487245 BTF3L4Q96K17 158 aa21.44■■□□□ 1.02
HLA-C-208ENST00000487245 IMMP2LQ96T52 175 aa21.44■■□□□ 1.02
HLA-C-208ENST00000487245 PXMP4Q9Y6I8 212 aa21.44■■□□□ 1.02
HLA-C-208ENST00000487245 CADP27708 2225 aa21.44■■□□□ 1.02
HLA-C-208ENST00000487245 TRAV20A0A0B4J274 112 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 hADV38S2A0JD32 116 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 DPRXA6NFQ7 191 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 DEFA4P12838 97 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 C1orf229Q6ZS94 237 aaPredicted RBP21.43■■□□□ 1.02
HLA-C-208ENST00000487245 LINC01551Q86U37 167 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 VKORC1L1Q8N0U8 176 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 NECAP1Q8NC96 275 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 ACY3Q96HD9 319 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 PFDN5Q99471 154 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 HIST1H2BLQ99880 126 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 CHODLQ9H9P2 273 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 NPVFQ9HCQ7 196 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 TMEM14BQ9NUH8 114 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 DSCAMO60469 2012 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 TET2Q6N021 2002 aaPredicted RBP21.43■■□□□ 1.02
HLA-C-208ENST00000487245 CUL9Q8IWT3 2517 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 C17orf100A8MU93 164 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 FNDC10F2Z333 226 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 CXorf1O96002 111 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 FABP4P15090 132 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 LCN2P80188 198 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 KCNIP4Q6PIL6 250 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 Q8NA96 180 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 LEAP2Q969E1 77 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 ELOVL1Q9BW60 279 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 DSCAML1Q8TD84 2053 aa21.43■■□□□ 1.02
HLA-C-208ENST00000487245 PRRC2CQ9Y520 2896 aaKnown RBP21.43■■□□□ 1.02
HLA-C-208ENST00000487245 OR4A8P0C604 315 aa21.42■■□□□ 1.02
HLA-C-208ENST00000487245 HSPE1P61604 102 aaKnown RBP21.42■■□□□ 1.02
HLA-C-208ENST00000487245 ADIPOQQ15848 244 aa21.42■■□□□ 1.02
HLA-C-208ENST00000487245 ACTL10Q5JWF8 245 aa21.42■■□□□ 1.02
HLA-C-208ENST00000487245 DUX4L9Q6RFH8 374 aaPredicted RBP21.42■■□□□ 1.02
HLA-C-208ENST00000487245 TCF23Q7RTU1 214 aa21.42■■□□□ 1.02
HLA-C-208ENST00000487245 LYG1Q8N1E2 194 aa21.42■■□□□ 1.02
HLA-C-208ENST00000487245 PCGF1Q9BSM1 259 aa21.42■■□□□ 1.02
HLA-C-208ENST00000487245 RPUSD1Q9UJJ7 312 aaKnown RBP21.42■■□□□ 1.02
HLA-C-208ENST00000487245 ATP5G3P48201 142 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 MEF2CQ06413 473 aaPredicted RBP21.41■■□□□ 1.02
HLA-C-208ENST00000487245 PDZD11Q5EBL8 140 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 FAM209BQ5JX69 171 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 ABHD12Q8N2K0 398 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 FAM216BQ8N7L0 139 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 OR1P1Q8NH06 330 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 RNASEH2CQ8TDP1 164 aaKnown RBP21.41■■□□□ 1.02
HLA-C-208ENST00000487245 PRDM13Q9H4Q3 707 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 LINC00312Q9Y6C7 94 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 MUC6Q6W4X9 2439 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 TANC2Q9HCD6 1990 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 PDLIM4P50479 330 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 C1orf159Q96HA4 380 aa21.41■■□□□ 1.02
HLA-C-208ENST00000487245 PACRGQ96M98 296 aaPredicted RBP21.41■■□□□ 1.02
HLA-C-208ENST00000487245 FRYQ5TBA9 3013 aa21.4■■□□□ 1.02
HLA-C-208ENST00000487245 TBR1Q16650 682 aa21.4■■□□□ 1.02
HLA-C-208ENST00000487245 MIC13Q5XKP0 118 aa21.4■■□□□ 1.02
HLA-C-208ENST00000487245 OR4A47Q6IF82 309 aa21.4■■□□□ 1.02
HLA-C-208ENST00000487245 RHOVQ96L33 236 aa21.4■■□□□ 1.02
HLA-C-208ENST00000487245 PATZ1Q9HBE1 687 aaKnown RBP21.4■■□□□ 1.02
HLA-C-208ENST00000487245 ZNF292O60281 2723 aa21.4■■□□□ 1.02
HLA-C-208ENST00000487245 GATCO43716 136 aaKnown RBP21.39■■□□□ 1.02
HLA-C-208ENST00000487245 THBDP07204 575 aa21.39■■□□□ 1.02
HLA-C-208ENST00000487245 IL6RP08887 468 aaPredicted RBP21.39■■□□□ 1.02
HLA-C-208ENST00000487245 BSPH1Q075Z2 132 aa21.39■■□□□ 1.02
HLA-C-208ENST00000487245 CST9LP1Q5W188 147 aa21.39■■□□□ 1.02
HLA-C-208ENST00000487245 CDPF1Q6NVV7 123 aa21.39■■□□□ 1.02
HLA-C-208ENST00000487245 SLC25A48Q6ZT89 311 aaKnown RBP21.39■■□□□ 1.02
HLA-C-208ENST00000487245 DYSFO75923 2080 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 A0A1W2PPQ1 181 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 DVL1O14640 695 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 ARL14EPLP0DKL9 152 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 NPY1RP25929 384 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 CCL8P80075 99 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 SPACA3Q8IXA5 215 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 SLC24A4Q8NFF2 622 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 OR5R1Q8NH85 324 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 TMEM204Q9BSN7 226 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 GAL3ST2Q9H3Q3 398 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 ENY2Q9NPA8 101 aa21.39■■□□□ 1.01
HLA-C-208ENST00000487245 RAI1Q7Z5J4 1906 aaPredicted RBP21.38■■□□□ 1.01
HLA-C-208ENST00000487245 NDUFB4O95168 129 aa21.38■■□□□ 1.01
HLA-C-208ENST00000487245 RPL29P47914 159 aaKnown RBP21.38■■□□□ 1.01
HLA-C-208ENST00000487245 UBE2G2P60604 165 aa21.38■■□□□ 1.01
HLA-C-208ENST00000487245 UTF1Q5T230 341 aa21.38■■□□□ 1.01
HLA-C-208ENST00000487245 TMEM144Q7Z5S9 345 aa21.38■■□□□ 1.01
HLA-C-208ENST00000487245 NGBQ9NPG2 151 aa21.38■■□□□ 1.01
HLA-C-208ENST00000487245 RBPJQ06330 500 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms