RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 HMX3A6NHT5 357 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 DISC1C4P0D8 188 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 KRASP01116 189 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 RPA2P15927 270 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 PI3P19957 117 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 PIGPP57054 158 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 SLC25A42Q86VD7 318 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 TTC9CQ8N5M4 171 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 ZFAND1Q8TCF1 268 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 NDUFA13Q9P0J0 144 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 V9GYH0 126 aa14.08□□□□□ -0.16
COL1A1-207ENST00000486572 A0A1B0GW64 132 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 E7EUB6 86 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 LINC01619G3V211 115 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 MYOD1P15172 320 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 G6PCP35575 357 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 ECI1P42126 302 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 FOXB2Q5VYV0 432 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 CADM3Q8N126 398 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 OR13C8Q8NGS7 320 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 MARCH1Q8TCQ1 289 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 MRGPRFQ96AM1 343 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 USMG5Q96IX5 58 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 COMMD5Q9GZQ3 224 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 ZNF257Q9Y2Q1 563 aa14.07□□□□□ -0.16
COL1A1-207ENST00000486572 IGHV4OR15-8A0A075B7B6 117 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 A0A087WW49 117 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 DPPA5A6NC42 116 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 NPIPB5A8MRT5 1133 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 PTBP1P26599 531 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL1A1-207ENST00000486572 OR2B8PP59922 312 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 DEFA5Q01523 94 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 PYDC2Q56P42 97 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 CCDC190Q86UF4 302 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 CCDC71LQ8N9Z2 235 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 PRRT1Q99946 306 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 THAP7Q9BT49 309 aaPredicted RBP14.06□□□□□ -0.16
COL1A1-207ENST00000486572 COPZ2Q9P299 210 aa14.06□□□□□ -0.16
COL1A1-207ENST00000486572 CGB1A6NKQ9 187 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 FAM223BA6NKX1 122 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 H0Y980 276 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 WIPF1O43516 503 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 PRH1P02810 166 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 HSPB1P04792 205 aaKnown RBP14.05□□□□□ -0.16
COL1A1-207ENST00000486572 SERPINE2P07093 398 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 CTSDP07339 412 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-207ENST00000486572 AREGP15514 252 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 RHOGP84095 191 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 ZNF45Q02386 682 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 SURF2Q15527 256 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-207ENST00000486572 ZNF79Q15937 498 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 PDLIM3Q53GG5 364 aaPredicted RBP14.05□□□□□ -0.16
COL1A1-207ENST00000486572 REC114Q7Z4M0 266 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 FAM223AQ8IWN6 122 aa14.05□□□□□ -0.16
COL1A1-207ENST00000486572 TRBV9A0A0B4J1U6 114 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 RBMXL2O75526 392 aaKnown RBP14.04□□□□□ -0.16
COL1A1-207ENST00000486572 SNAPC5O75971 98 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 DHFRP00374 187 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 IGKV1-39P01597 117 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 PRB2P02812 416 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-207ENST00000486572 IGKV1D-39P04432 117 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 PSMB6P28072 239 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 SLURP1P55000 103 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 SPANXN2Q5MJ10 180 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 THOC7Q6I9Y2 204 aaKnown RBP14.04□□□□□ -0.16
COL1A1-207ENST00000486572 Q8N402 240 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 NECAP1Q8NC96 275 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 OR51S1Q8NGJ8 323 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 TRIM63Q969Q1 353 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 SEC22AQ96IW7 307 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 TP53RKQ96S44 253 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 TSC22D3Q99576 134 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 SRSF8Q9BRL6 282 aaKnown RBP14.04□□□□□ -0.16
COL1A1-207ENST00000486572 QTRT1Q9BXR0 403 aaKnown RBP14.04□□□□□ -0.16
COL1A1-207ENST00000486572 RANGRFQ9HD47 186 aaPredicted RBP14.04□□□□□ -0.16
COL1A1-207ENST00000486572 AKIP1Q9NQ31 210 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 SLC2A8Q9NY64 477 aa14.04□□□□□ -0.16
COL1A1-207ENST00000486572 C14orf166Q9Y224 244 aaKnown RBP14.04□□□□□ -0.16
COL1A1-207ENST00000486572 C3orf85A0A1B0GTC6 90 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 SEC14L6B5MCN3 397 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 CRYGCP07315 174 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 HOXD3P31249 432 aaPredicted RBP14.03□□□□□ -0.16
COL1A1-207ENST00000486572 ETV6P41212 452 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 EGFEM1PQ0D2K5 195 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 C9orf66Q5T8R8 295 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 ZNF343Q6P1L6 599 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 DCUN1D4Q92564 292 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 MCUBQ9NWR8 336 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 SCP2D1Q9UJQ7 156 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 PRNDQ9UKY0 176 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 NSG2Q9Y328 171 aa14.03□□□□□ -0.16
COL1A1-207ENST00000486572 IGLC7A0M8Q6 106 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 ANKRD34BA5PLL1 514 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 OVOL1O14753 267 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 TRAPPC2P0DI81 140 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 TRAPPC2BP0DI82 140 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 CTRB1P17538 263 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 FAUP35544 74 aaKnown RBP14.02□□□□□ -0.17
COL1A1-207ENST00000486572 AP3S2P59780 193 aa14.02□□□□□ -0.17
COL1A1-207ENST00000486572 ATP5G2Q06055 141 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms