RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 DBX1A6NMT0 343 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 CREBL2O60519 120 aaPredicted RBP12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 SFT2D2O95562 160 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 P0C879 139 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 HLA-GP17693 338 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 VAMP1P23763 118 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 AKR1C2P52895 323 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 OR2B8PP59922 312 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 ANKRD55Q3KP44 614 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 TMEM268Q5VZI3 342 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 UNQ5815/PRO19632Q6UWF5 114 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 CADM3Q8N126 398 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 RBPMSQ93062 196 aaKnown RBP12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 TMEM56Q96MV1 263 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 CITED2Q99967 270 aaPredicted RBP12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 TMEM56-RWDD3S4R434 201 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 TRRAPQ9Y4A5 3859 aa12.13□□□□□ -0.47
RPUSD3-217ENST00000485705 A0A1W2PN81 502 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 HMX3A6NHT5 357 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 SOX15O60248 233 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 FBXO24O75426 580 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 MAS1LP35410 378 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 CHRNA7P36544 502 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 ZNF695Q8IW36 515 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 MINDY2Q8NBR6 621 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 FYTTD1Q96QD9 318 aaKnown RBP12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 NUDT15Q9NV35 164 aa12.12□□□□□ -0.47
RPUSD3-217ENST00000485705 TEX50A0A1B0GTY4 177 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 TEX22C9J3V5 150 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 SNAPC5O75971 98 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 IGHG4P01861 327 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 H2AFB2P0C5Z0 115 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 OR4E1P0C645 316 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 SLC35B1P78383 322 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 CD83Q01151 205 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 TMEM267Q0VDI3 215 aaPredicted RBP12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 SHISA2Q6UWI4 295 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 Q6ZRM9 215 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 NRARPQ7Z6K4 114 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 SLC35G3Q8N808 338 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 ENKURQ8TC29 256 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 GPR146Q96CH1 333 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 PHB2Q99623 299 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 KLK15Q9H2R5 256 aa12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 FOXA2Q9Y261 457 aaPredicted RBP12.11□□□□□ -0.47
RPUSD3-217ENST00000485705 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 A0A0B4J293 547 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 C15orf61A6NNL5 157 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 ANXA3P12429 323 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 RAB25P57735 213 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 DEFA1P59665 94 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 DEFA3P59666 94 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 UBE2MP61081 183 aaKnown RBP12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 DHRS2Q13268 280 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 TEX38Q6PEX7 206 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 LGI3Q8N145 548 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 OR4X2Q8NGF9 303 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 OR52B4Q8NGK2 314 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 RNASE11Q8TAA1 199 aaKnown RBP12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 IL22RA2Q969J5 263 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 SPIN2AQ99865 258 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 SPIN2BQ9BPZ2 258 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 QTRT1Q9BXR0 403 aaKnown RBP12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 GON7Q9BXV9 100 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 COMMD5Q9GZQ3 224 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 TMEM14BQ9NUH8 114 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 OR51B2Q9Y5P1 312 aa12.1□□□□□ -0.47
RPUSD3-217ENST00000485705 TCRBV4S1A1TA0A5B7 111 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 ADARB2-AS1A8MUL3 147 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 ATG12O94817 140 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 IGLV1-40P01703 118 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 HLA-AP01891 365 aaKnown RBP12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 RPLP1P05386 114 aaKnown RBP12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 PF4V1P10720 104 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 AREGP15514 252 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 SPNP16150 400 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 PSMB8P28062 276 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 FOXE3Q13461 319 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 C4orf46Q504U0 113 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 C19orf35Q6ZS72 473 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 C18orf65Q6ZTR6 163 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 LYG2Q86SG7 212 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 OR10W1Q8NGF6 305 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 OR4A16Q8NH70 328 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 PRNDQ9UKY0 176 aa12.09□□□□□ -0.47
RPUSD3-217ENST00000485705 A0A0B4J2A0 478 aa12.08□□□□□ -0.48
RPUSD3-217ENST00000485705 A0A1W2PRX2 142 aa12.08□□□□□ -0.48
RPUSD3-217ENST00000485705 ELANEP08246 267 aa12.08□□□□□ -0.48
RPUSD3-217ENST00000485705 FGF2P09038 288 aa12.08□□□□□ -0.48
RPUSD3-217ENST00000485705 SRPXP78539 464 aa12.08□□□□□ -0.48
RPUSD3-217ENST00000485705 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
RPUSD3-217ENST00000485705 CXorf66Q5JRM2 361 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms