RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 TECRQ9NZ01 308 aaKnown RBP9.81□□□□□ -0.84
HDAC6-227ENST00000485102 MTFP1Q9UDX5 166 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 ANAPC10Q9UM13 185 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 RBM7Q9Y580 266 aaKnown RBP9.81□□□□□ -0.84
HDAC6-227ENST00000485102 DMRT1Q9Y5R6 373 aa9.81□□□□□ -0.84
HDAC6-227ENST00000485102 KMT2AQ03164 3969 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 FRAS1Q86XX4 4008 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 OR11H12B2RN74 326 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 LGALS9O00182 355 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 CD7P09564 240 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 INPP1P49441 399 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 RHOGP84095 191 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 DEFA5Q01523 94 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 ATP5G2Q06055 141 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 CDK10Q15131 360 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 MSMO1Q15800 293 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 VMA21Q3ZAQ7 101 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 CCDC190Q86UF4 302 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 TTC9CQ8N5M4 171 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 DEFB125Q8N687 156 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 NECAP1Q8NC96 275 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 OSR1Q8TAX0 266 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-227ENST00000485102 SRSF12Q8WXF0 261 aaKnown RBP9.8□□□□□ -0.84
HDAC6-227ENST00000485102 SPIN2AQ99865 258 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 SPIN2BQ9BPZ2 258 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 FAM110AQ9BQ89 295 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 WDR12Q9GZL7 423 aaKnown RBP9.8□□□□□ -0.84
HDAC6-227ENST00000485102 OR2D2Q9H210 308 aa9.8□□□□□ -0.84
HDAC6-227ENST00000485102 BET1O15155 118 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 TUSC2O75896 110 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 GSTT2P0CG29 244 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 DUTP33316 252 aaKnown RBP9.79□□□□□ -0.84
HDAC6-227ENST00000485102 TSPAN5P62079 268 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 EXOSC2Q13868 293 aaKnown RBP9.79□□□□□ -0.84
HDAC6-227ENST00000485102 PYDC2Q56P42 97 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 IGSF11Q5DX21 431 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 ARRDC1Q8N5I2 433 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 TMEM229BQ8NBD8 167 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 ZBTB34Q8NCN2 500 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 OR6F1Q8NGZ6 308 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 GIMAP1Q8WWP7 306 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 LINC00476Q8WZB0 136 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 C5orf30Q96GV9 206 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 SCGB3A2Q96PL1 93 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 ABHD1Q96SE0 405 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 PHB2Q99623 299 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 SOSTQ9BQB4 213 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 SRD5A3Q9H8P0 318 aa9.79□□□□□ -0.84
HDAC6-227ENST00000485102 C2orf70A6NJV1 201 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 CENPXA8MT69 81 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 SSX5O60225 188 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 CREBL2O60519 120 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-227ENST00000485102 FOLR2P14207 255 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 HERV-K104P61576 105 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 TNXAQ16473 311 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 KLK9Q2XQG4 91 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 RNASE10Q5GAN6 216 aaKnown RBP9.78□□□□□ -0.84
HDAC6-227ENST00000485102 SLC25A42Q86VD7 318 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 CCDC32Q9BV29 185 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 KLK9Q9UKQ9 250 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 RBMX2Q9Y388 322 aaKnown RBP9.78□□□□□ -0.84
HDAC6-227ENST00000485102 OR2W1Q9Y3N9 320 aa9.78□□□□□ -0.84
HDAC6-227ENST00000485102 PIGBOS1A0A0B4J2F0 54 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 DISC1C4P0D8 188 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 MPPED1O15442 326 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 GGCTO75223 188 aaKnown RBP9.77□□□□□ -0.85
HDAC6-227ENST00000485102 CRYZL1O95825 349 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 AKAIN1P0CW23 69 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 APELAP0DMC3 54 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 TRIQKQ629K1 86 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 DHRS11Q6UWP2 260 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 SLC16A13Q7RTY0 426 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 MMD2Q8IY49 270 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 H1FOOQ8IZA3 346 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-227ENST00000485102 TOMM5Q8N4H5 51 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 OR52I2Q8NH67 350 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 DYNLRB2Q8TF09 96 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 PRRT1Q99946 306 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 C7orf50Q9BRJ6 194 aaKnown RBP9.77□□□□□ -0.85
HDAC6-227ENST00000485102 ZNF430Q9H8G1 570 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-227ENST00000485102 EHFQ9NZC4 300 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 SCP2D1Q9UJQ7 156 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 ZNF257Q9Y2Q1 563 aa9.77□□□□□ -0.85
HDAC6-227ENST00000485102 NAP1L6A6NFF2 107 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 LINC00473A8K010 186 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 ACTL6BO94805 426 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 PRH1P02810 166 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 FCER2P06734 321 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 CBLN1P23435 193 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 ZNF846Q147U1 533 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 C15orf32Q32M92 178 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 STEAP1BQ6NZ63 245 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 IDO2Q6ZQW0 420 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 WFDC3Q8IUB2 231 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 CMTM1Q8IZ96 169 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 AIFM2Q9BRQ8 373 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 WFDC10AQ9H1F0 79 aa9.76□□□□□ -0.85
HDAC6-227ENST00000485102 A8MWP6 167 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms