RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 UBE2KP61086 200 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 TNFRSF9Q07011 255 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 AESQ08117 197 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 SLAQ13239 276 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 EIF4EBP1Q13541 118 aaPredicted RBP6.34□□□□□ -1.39
SNX13-208ENST00000482558 CLINT1Q14677 625 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 GUCA2BQ16661 112 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 ZNF585BQ52M93 769 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 OR10A7Q8NGE5 316 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 OR52E5Q8NH55 327 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 OR1L1Q8NH94 360 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 FAM213BQ8TBF2 198 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 FAM222BQ8WU58 562 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 ZNF479Q96JC4 524 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 OR2D2Q9H210 308 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 C1RLQ9NZP8 487 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 RNF7Q9UBF6 113 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 PRELID3BQ9Y3B1 194 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 EP300Q09472 2414 aaPredicted RBP6.33□□□□□ -1.4
SNX13-208ENST00000482558 A0A1W2PPV4 95 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 RBFOX3A6NFN3 312 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 C16orf97H3BN30 126 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 C15orf65H3BRN8 121 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 ZNHIT1O43257 154 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 CLN5O75503 358 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 CST7O76096 145 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 HPRT1P00492 218 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 IFNA1P01562 189 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 IGKV1-39P01597 117 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 IGKV1-5P01602 117 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 IGKV1D-39P04432 117 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 HSPB1P04792 205 aaKnown RBP6.33□□□□□ -1.4
SNX13-208ENST00000482558 CD55P08174 381 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 P0C879 139 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 GP9P14770 177 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 ADCYAP1P18509 176 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 OMGP23515 440 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 UCNP55089 124 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 RAB11AP62491 216 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 ESPL1Q14674 2120 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 LRRC75BQ2VPJ9 315 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 KHDC3LQ587J8 217 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 TMEM14EPQ6UXP3 125 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 ZNF826PQ6ZT77 177 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 H2BFWTQ7Z2G1 175 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 C15orf54Q8N8G6 183 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 ZNF596Q8TC21 504 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 MRGPRDQ8TDS7 321 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 TCTEX1D2Q8WW35 142 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 RAB1CQ92928 201 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 SDSLQ96GA7 329 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 GRAMD2BQ96HH9 432 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 OR2V2Q96R30 315 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 ZNF251Q9BRH9 671 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 GGACTQ9BVM4 153 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 UFSP2Q9NUQ7 469 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 GNG12Q9UBI6 72 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 PRELID1Q9Y255 219 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 FBXO7Q9Y3I1 522 aa6.33□□□□□ -1.4
SNX13-208ENST00000482558 KLF2Q9Y5W3 355 aaPredicted RBP6.33□□□□□ -1.4
SNX13-208ENST00000482558 FRYLO94915 3013 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 TRGV10A0A0A0MS01 117 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 C17orf112F2Z3M2 114 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 WNT9BO14905 357 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 PPIHO43447 177 aaKnown RBP6.32□□□□□ -1.4
SNX13-208ENST00000482558 TMEM50AO95807 157 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 CRYGBP07316 175 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 ZFP36P26651 326 aaKnown RBP6.32□□□□□ -1.4
SNX13-208ENST00000482558 GLIPR1P48060 266 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 ERVK-16P61578 105 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 GNB2P62879 340 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 TNFAIP6P98066 277 aaPredicted RBP6.32□□□□□ -1.4
SNX13-208ENST00000482558 AKR1C1Q04828 323 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 RNF212Q495C1 297 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 MORN2Q502X0 79 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 SOHLH1Q5JUK2 328 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 ZNF506Q5JVG8 444 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 RNASEKQ6P5S7 137 aaKnown RBP6.32□□□□□ -1.4
SNX13-208ENST00000482558 ATRAIDQ6UW56 229 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 RBMS3Q6XE24 437 aaKnown RBP6.32□□□□□ -1.4
SNX13-208ENST00000482558 TGIF2LXQ8IUE1 241 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 CD177Q8N6Q3 437 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 THAP8Q8NA92 274 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 OR10P1Q8NGE3 313 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 OR13A1Q8NGR1 328 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 MBD3L1Q8WWY6 194 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 P2RX4Q99571 388 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 AGMATQ9BSE5 352 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 TMEM147Q9BVK8 224 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 SH3BGRL3Q9H299 93 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 ZNF665Q9H7R5 613 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 LINC00574Q9H8X3 128 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 KCNIP2Q9NS61 270 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 ZNF835Q9Y2P0 537 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 MUC3AQ02505 3323 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 WDFY3Q8IZQ1 3526 aa6.32□□□□□ -1.4
SNX13-208ENST00000482558 INTS1Q8N201 2190 aaKnown RBP6.31□□□□□ -1.4
SNX13-208ENST00000482558 GTF3C1Q12789 2109 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 IGKV1D-17A0A075B6S4 117 aa6.31□□□□□ -1.4
SNX13-208ENST00000482558 A0A0G2JRQ6 117 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms