RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ZNF660Q6AZW8 331 aaPredicted RBP15.95■□□□□ 0.14
CCM2-214ENST00000481194 CACNG8Q8WXS5 425 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 TBL2Q9Y4P3 447 aaKnown RBP15.95■□□□□ 0.14
CCM2-214ENST00000481194 KLF2Q9Y5W3 355 aaPredicted RBP15.95■□□□□ 0.14
CCM2-214ENST00000481194 LINC00869P0C866 280 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 SAA1P0DJI8 122 aaPredicted RBP15.95■□□□□ 0.14
CCM2-214ENST00000481194 SMAD7O15105 426 aaKnown RBP15.95■□□□□ 0.14
CCM2-214ENST00000481194 ID1P41134 155 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 LOXL3P58215 753 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 SLC25A48Q6ZT89 311 aaKnown RBP15.95■□□□□ 0.14
CCM2-214ENST00000481194 METTL26Q96S19 204 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 FBXL15Q9H469 300 aa15.95■□□□□ 0.14
CCM2-214ENST00000481194 MED12Q93074 2177 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 CA2P00918 260 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 PAXXQ9BUH6 204 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 PAFAH1B2P68402 229 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 TTC28Q96AY4 2481 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 PLAUP00749 431 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 RD3LP0DJH9 198 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 PQLC2Q6ZP29 291 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 TPPP3Q9BW30 176 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 IFI27L2Q9H2X8 130 aa15.94■□□□□ 0.14
CCM2-214ENST00000481194 GATA3P23771 443 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 FBXL19-AS1Q494R0 122 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 ERVFC1-1P60608 527 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 HABP2Q14520 560 aaPredicted RBP15.93■□□□□ 0.14
CCM2-214ENST00000481194 ZNF273Q14593 569 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 AARDQ4LEZ3 155 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 FAM209BQ5JX69 171 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 VMO1Q7Z5L0 202 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 Q8NA96 180 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 OR11H4Q8NGC9 324 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 JMJD8Q96S16 334 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 IGHV3OR16-10A0A075B7F0 116 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 ELOA3CA0A087WX78 387 aaPredicted RBP15.93■□□□□ 0.14
CCM2-214ENST00000481194 HIST1H1EP10412 219 aaKnown RBP15.93■□□□□ 0.14
CCM2-214ENST00000481194 SELLP14151 372 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 OR5I1Q13606 314 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 WDR86Q86TI4 376 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 Q8NFD4 153 aa15.93■□□□□ 0.14
CCM2-214ENST00000481194 B4DEV8 164 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 GPX4P36969 197 aaPredicted RBP15.92■□□□□ 0.14
CCM2-214ENST00000481194 PPP1R27Q86WC6 154 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 STPG3Q8N7X2 389 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 IZUMO4Q1ZYL8 232 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 TPTE2P1Q5T6R2 138 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 GAB2Q9UQC2 676 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 SEC11CQ9BY50 192 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 IGSF23A1L1A6 192 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 SHISA9B4DS77 424 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 RUNX1Q01196 453 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 FAM162BQ5T6X4 162 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 ZNF257Q9Y2Q1 563 aa15.92■□□□□ 0.14
CCM2-214ENST00000481194 FAM106AQ4KMX7 169 aa15.91■□□□□ 0.14
CCM2-214ENST00000481194 RSG1Q9BU20 258 aa15.91■□□□□ 0.14
CCM2-214ENST00000481194 MPDZO75970 2070 aa15.91■□□□□ 0.14
CCM2-214ENST00000481194 A0A0G2JLM5 398 aa15.91■□□□□ 0.14
CCM2-214ENST00000481194 SCGB1D1O95968 90 aa15.91■□□□□ 0.14
CCM2-214ENST00000481194 SEM1Q6ZVN7 128 aa15.91■□□□□ 0.14
CCM2-214ENST00000481194 CHEK1O14757 476 aa15.91■□□□□ 0.14
CCM2-214ENST00000481194 DNAJC4Q9NNZ3 241 aa15.91■□□□□ 0.14
CCM2-214ENST00000481194 ZNF880Q6PDB4 577 aa15.91■□□□□ 0.14
CCM2-214ENST00000481194 IGHV3-21A0A0B4J1V1 117 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 MED19A0JLT2 244 aaPredicted RBP15.9■□□□□ 0.14
CCM2-214ENST00000481194 BATFQ16520 125 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 OR4D5Q8NGN0 318 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 BCL2P10415 239 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 CYB5R2Q6BCY4 276 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 DYNLRB2Q8TF09 96 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 RABAC1Q9UI14 185 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 GUSBP1Q15486 140 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 DMRTC2Q8IXT2 367 aaPredicted RBP15.9■□□□□ 0.14
CCM2-214ENST00000481194 TMEM218A2RU14 115 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 PRCDQ00LT1 54 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 ID3Q02535 119 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 TMEM177Q53S58 311 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 LY6G6FQ5SQ64 297 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 PRR27Q6MZM9 219 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 ZNF418Q8TF45 676 aaPredicted RBP15.9■□□□□ 0.14
CCM2-214ENST00000481194 ANAPC16Q96DE5 110 aa15.9■□□□□ 0.14
CCM2-214ENST00000481194 LRRC75BQ2VPJ9 315 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 BAGE3Q86Y29 109 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 BAGE2Q86Y30 109 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 BPIFA4PQ86YQ2 179 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 C2orf68Q2NKX9 166 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 LINC01356Q8N9X3 169 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 GATAD1Q8WUU5 269 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 SLC25A33Q9BSK2 321 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 FOXA2Q9Y261 457 aaPredicted RBP15.89■□□□□ 0.13
CCM2-214ENST00000481194 PAGE4O60829 102 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 DANCRP0C864 163 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 LDLRAD3Q86YD5 345 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 YAE1D1Q9NRH1 226 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 NPFFR1Q9GZQ6 430 aa15.89■□□□□ 0.13
CCM2-214ENST00000481194 CLDN34H7C241 214 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 MIC13Q5XKP0 118 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 LYPD2Q6UXB3 125 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 KAAG1Q9UBP8 84 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 TIMM23O14925 209 aa15.88■□□□□ 0.13
CCM2-214ENST00000481194 PRTN3P24158 256 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms