RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 DNAJC27Q9NZQ0 273 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 STX18Q9P2W9 335 aaKnown RBP3.06□□□□□ -1.92
UPF3A-207ENST00000481131 PRO0461Q9UI25 63 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 POLR1DQ9Y2S0 133 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 TMEM14AQ9Y6G1 99 aa3.06□□□□□ -1.92
UPF3A-207ENST00000481131 MED13LQ71F56 2210 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 DYSFO75923 2080 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 FLNAP21333 2647 aaKnown RBP3.05□□□□□ -1.92
UPF3A-207ENST00000481131 C5orf49A4QMS7 147 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 SGCEO43556 437 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 LY6HO94772 140 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 UBL3O95164 117 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 FARS2O95363 451 aaKnown RBP3.05□□□□□ -1.92
UPF3A-207ENST00000481131 IFNGP01579 166 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 CD8AP01732 235 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 APCSP02743 223 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 OR8U9P0C7N5 309 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 CD37P11049 281 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 ZNF35P13682 527 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 ZNF3P17036 446 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 SRMP19623 302 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 CCNOP22674 350 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 CRABP1P29762 137 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 GGT2P36268 569 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 ARR3P36575 388 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 MPV17P39210 176 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 HCCSP53701 268 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 RPL23P62829 140 aaKnown RBP3.05□□□□□ -1.92
UPF3A-207ENST00000481131 HIST1H3AP68431 136 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 GLO1Q04760 184 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 APOFQ13790 326 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 MAD2L1BPQ15013 274 aaPredicted RBP3.05□□□□□ -1.92
UPF3A-207ENST00000481131 SLC36A2Q495M3 483 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 KLHL12Q53G59 568 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 HIST2H3PS2Q5TEC6 136 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 FAM27BQ5VT28 67 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 C12orf73Q69YU5 71 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 WDR82Q6UXN9 313 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 HIST2H3AQ71DI3 136 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 NAA40Q86UY6 237 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 LRP11Q86VZ4 500 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 CALHM1Q8IU99 346 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 ZCCHC24Q8N2G6 241 aaKnown RBP3.05□□□□□ -1.92
UPF3A-207ENST00000481131 INO80EQ8NBZ0 244 aaPredicted RBP3.05□□□□□ -1.92
UPF3A-207ENST00000481131 SLC30A7Q8NEW0 376 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 OR6N2Q8NGY6 317 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 FRZBQ92765 325 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 NARS2Q96I59 477 aaKnown RBP3.05□□□□□ -1.92
UPF3A-207ENST00000481131 CCL19Q99731 98 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 KCNS3Q9BQ31 491 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 OR51V1Q9H2C8 321 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 NECAP2Q9NVZ3 263 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 USE1Q9NZ43 259 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 BAIAP2Q9UQB8 552 aa3.05□□□□□ -1.92
UPF3A-207ENST00000481131 IGHV3OR16-9A0A0B4J2B5 98 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 IGHV1-69DA0A0B4J2H0 117 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 OR6C6A6NF89 314 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 H0YJW9 148 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 ZNF593O00488 134 aaPredicted RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 BPY2O14599 106 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 RBFOX2O43251 390 aaKnown RBP eCLIP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 XRCC2O43543 280 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 OR4A8P0C604 315 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 SLC2A1P11166 492 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 APLNRP35414 380 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 GDI2P50395 445 aaKnown RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 LSM6P62312 80 aaKnown RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 MOBPQ13875 183 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 RBMY1FQ15415 496 aaKnown RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 TBC1D28Q2M2D7 210 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 ABCA11PQ4W5N1 156 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 SPRNQ5BIV9 151 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 OGFRL1Q5TC84 451 aaPredicted RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 DNM1P34Q6PK57 102 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 PLEKHG7Q6ZR37 379 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 SSX6Q7RTT6 188 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 MRPL21Q7Z2W9 205 aaKnown RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 DCXRQ7Z4W1 244 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 C10orf67Q8IYJ2 551 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 LGI3Q8N145 548 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 MUC15Q8N387 334 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 OR2T4Q8NH00 348 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 OR2AE1Q8NHA4 323 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 SYNPRQ8TBG9 265 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 SLC25A40Q8TBP6 338 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 CIRBP-AS1Q8TBR5 109 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 CYGBQ8WWM9 190 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 DNAJC9Q8WXX5 260 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 TBX5Q99593 518 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 PITX2Q99697 317 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 HSD17B10Q99714 261 aaKnown RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 DHRS9Q9BPW9 319 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 C9orf16Q9BUW7 83 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 OR2J1Q9GZK6 312 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 FGF23Q9GZV9 251 aaPredicted RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 NAA50Q9GZZ1 169 aaKnown RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 RGCCQ9H4X1 137 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 ZNF442Q9H7R0 627 aa3.04□□□□□ -1.92
UPF3A-207ENST00000481131 MYOZ1Q9NP98 299 aaPredicted RBP3.04□□□□□ -1.92
UPF3A-207ENST00000481131 SIRT7Q9NRC8 400 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms