RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 LOC100130705A0A1B0GUX0 176 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 CGB1A6NKQ9 187 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 J3QRK9 145 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 TGOLN2O43493 480 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 KBTBD11O94819 623 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 AMBPP02760 352 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 CRYGCP07315 174 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 GSTT2P0CG29 244 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 GSTT2BP0CG30 244 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 CELP19835 753 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 SERPINB10P48595 397 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 RPL30P62888 115 aaKnown RBP7.03□□□□□ -1.28
GPNMB-211ENST00000479625 TPBGQ13641 420 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 TMEM187Q14656 261 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 P2RY14Q15391 338 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 PLAC9Q5JTB6 97 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 PVRIGQ6DKI7 326 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 LAMTOR1Q6IAA8 161 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 PLET1Q6UQ28 207 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 ZNF767PQ75MW2 155 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 KCTD9Q7L273 389 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 OR10J5Q8NHC4 309 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 ADTRPQ96IZ2 230 aa7.03□□□□□ -1.28
GPNMB-211ENST00000479625 C6orf62Q9GZU0 229 aaPredicted RBP7.03□□□□□ -1.28
GPNMB-211ENST00000479625 DAZ1Q9NQZ3 744 aaKnown RBP7.03□□□□□ -1.28
GPNMB-211ENST00000479625 RBM7Q9Y580 266 aaKnown RBP7.03□□□□□ -1.28
GPNMB-211ENST00000479625 FAT1Q14517 4588 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 OR2T8A6NH00 312 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 NPIPB6E9PJ23 425 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 RAB27BO00194 218 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 FCGR3AP08637 254 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 DEFA4P12838 97 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 PSMD7P51665 324 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 SSX9Q7RTT3 188 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 FAM89BQ8N5H3 189 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 CXorf58Q96LI9 332 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 C20orf24Q9BUV8 137 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 OR51E2Q9H255 320 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 HRH4Q9H3N8 390 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 HSF4Q9ULV5 492 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 CELA1Q9UNI1 258 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 AGRNO00468 2067 aa7.02□□□□□ -1.29
GPNMB-211ENST00000479625 IGHV3-49A0A0A0MS15 119 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 CDK2AP2O75956 126 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 DHFRP00374 187 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 P0DMU3 169 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 FAM231AP0DMU4 169 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 FAM231CP0DMU5 169 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 HIST1H1BP16401 226 aaKnown RBP7.01□□□□□ -1.29
GPNMB-211ENST00000479625 CRHBPP24387 322 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 MAPK3P27361 379 aaPredicted RBP7.01□□□□□ -1.29
GPNMB-211ENST00000479625 PLA2G7Q13093 441 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 ARFRP1Q13795 201 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 KLK9Q2XQG4 91 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 LGALS9BQ3B8N2 356 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 NR2C2APQ86WQ0 139 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 PUSL1Q8N0Z8 303 aaKnown RBP7.01□□□□□ -1.29
GPNMB-211ENST00000479625 TMEM167AQ8TBQ9 72 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 TMEM80Q96HE8 168 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 OR2A7Q96R45 310 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 RNF2Q99496 336 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 GINS4Q9BRT9 223 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 URM1Q9BTM9 101 aaKnown RBP7.01□□□□□ -1.29
GPNMB-211ENST00000479625 RNF126Q9BV68 326 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 KLK9Q9UKQ9 250 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
GPNMB-211ENST00000479625 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
GPNMB-211ENST00000479625 IGHV3-21A0A0B4J1V1 117 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 C16orf90A8MZG2 172 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 CLDN12P56749 244 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 TAS2R43P59537 309 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 KRTAP19-4Q3LI73 84 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 TTC23Q5W5X9 447 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 LEMD1Q68G75 181 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 Q6ZR54 194 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 H1FOOQ8IZA3 346 aaPredicted RBP7□□□□□ -1.29
GPNMB-211ENST00000479625 GBGT1Q8N5D6 347 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 ZNF414Q96IQ9 312 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 GPHA2Q96T91 129 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 GFI1Q99684 422 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 MRPS7Q9Y2R9 242 aaKnown RBP7□□□□□ -1.29
GPNMB-211ENST00000479625 KCNK7Q9Y2U2 307 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 ETV7Q9Y603 341 aa7□□□□□ -1.29
GPNMB-211ENST00000479625 IGKV1D-8A0A087WSZ0 117 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 DEFB131BA0A096LNP1 70 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 IGLC7A0M8Q6 106 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 IRGMA1A4Y4 181 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 C15orf61A6NNL5 157 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 IGLV2-14P01704 120 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 BRWD1-AS2P59051 145 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 ACSM3Q53FZ2 586 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 Q6ZRM9 215 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 Q8N1X5 172 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 VSTM2AQ8TAG5 236 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 PHYHIPQ92561 330 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 PLGRKTQ9HBL7 147 aa6.99□□□□□ -1.29
GPNMB-211ENST00000479625 A0A075B6Q4 140 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 IGHV3OR16-13A0A075B7E8 117 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 IGHV3-74A0A0B4J1X5 117 aa6.98□□□□□ -1.29
GPNMB-211ENST00000479625 NDUFA4O00483 81 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms