RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ERVFC1-1P60608 527 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 RANP62826 216 aaKnown RBP5.04□□□□□ -1.6
SF3B1-209ENST00000479532 PLA2G7Q13093 441 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 KIAA0141Q14154 515 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-209ENST00000479532 GAMTQ14353 236 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 KIR2DS1Q14954 304 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 FAM120AOSQ5T036 256 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 AKR1C8PQ5T2L2 129 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 RTN4RL2Q86UN3 420 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 HIST3H2BBQ8N257 126 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 INO80EQ8NBZ0 244 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-209ENST00000479532 LFNGQ8NES3 379 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 OR5AP2Q8NGF4 316 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 OR4A4PQ8NGN8 299 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 PLPPR1Q8TBJ4 325 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 MRPL30Q8TCC3 161 aaKnown RBP5.04□□□□□ -1.6
SF3B1-209ENST00000479532 FAM216AQ8WUB2 273 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 FCAMRQ8WWV6 532 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 LHX4Q969G2 390 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 GALMQ96C23 342 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 SLC25A38Q96DW6 304 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 SIRPDQ9H106 197 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.04□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM242Q9NWH2 141 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 CALYQ9NYX4 217 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 IDI2-AS1Q9NZ38 188 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 AK3Q9UIJ7 227 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 ZFP30Q9Y2G7 519 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 DSCAML1Q8TD84 2053 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 VPS13CQ709C8 3753 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 MALRD1Q5VYJ5 2156 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.03□□□□□ -1.63e-12■■■□□ 17.7
SF3B1-209ENST00000479532 ITPR3Q14573 2671 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 TRAV14DV4A0A0A6YYC5 116 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 TRBV6-6A0A0A6YYG2 114 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 TRAV40A0A0B4J280 105 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 KIR2DL5BA0A0G2JN68 375 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 KIR2DL5BA0A0G2JPC4 375 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 A0A1W2PPE3 182 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 IFITM10A6NMD0 228 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 FOXI3A8MTJ6 420 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 C17orf98A8MV24 154 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 B4DEV8 164 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 SDCBPO00560 298 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 ADAP1O75689 374 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 GAPDHP04406 335 aaKnown RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 SFTA3P0C7M3 94 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 FAM157CP0CG43 387 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 OR5H8P0DN80 308 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 IGHV1-8P0DP01 117 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 LYL1P12980 280 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF25P17030 456 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 DTYMKP23919 212 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 NFYBP25208 207 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 LUMP51884 338 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 PRRX1P54821 245 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 TAS2R20P59543 309 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 UBE2MP61081 183 aaKnown RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 DGCR2P98153 550 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 SURF2Q15527 256 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 LTC4SQ16873 150 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF260Q3ZCT1 412 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 PLAC9Q5JTB6 97 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 PRAMEF5Q5TYX0 476 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 PET117Q6UWS5 81 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 Q71RC1 249 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 KIR2DL5AQ8N109 375 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 GAPTQ8N292 157 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 OR13A1Q8NGR1 328 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 DYRK2Q92630 601 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 CLCC1Q96S66 551 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF471Q9BX82 626 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 CLEC7AQ9BXN2 247 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM133Q9H2Q1 129 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 TAF9BQ9HBM6 251 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF286AQ9HBT8 521 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 TREM1Q9NP99 234 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF581Q9P0T4 197 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 DOK5Q9P104 306 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 AMMECR1Q9Y4X0 333 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-209ENST00000479532 MED13LQ71F56 2210 aa5.03□□□□□ -1.6
SF3B1-209ENST00000479532 ABCA2Q9BZC7 2435 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 ARHGAP32A7KAX9 2087 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 IGHV1-69DA0A0B4J2H0 117 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 C7orf77A4D0Y5 90 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 TMEM235A6NFC5 223 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 OR5H14A6NHG9 310 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 CBY3A6NI87 242 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 INAFM1C9JVW0 142 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 NAPSAO96009 420 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 IGHV1-69P01742 117 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 HBZP02008 142 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 ARG1P05089 322 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 EGR2P11161 476 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-209ENST00000479532 MMP9P14780 707 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 TBPP20226 339 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 COX7A1P24310 79 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 IL3RAP26951 378 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 PRSS3P35030 304 aa5.02□□□□□ -1.61
SF3B1-209ENST00000479532 SSTR5P35346 364 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms