RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 CGB1A6NKQ9 187 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 GABARAPH6UMI1 98 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 SAP30O75446 220 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 OR2J3O76001 311 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 PGAM2P15259 253 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 UCP3P55916 312 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 ERVK-16P61578 105 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 IL18Q14116 193 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 ZNF343Q6P1L6 599 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 SLC25A42Q86VD7 318 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 SLC38A6Q8IZM9 456 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 SLIRPQ9GZT3 109 aaKnown RBP17.48■□□□□ 0.39
TRAF4-211ENST00000478021 SLC2A9Q9NRM0 540 aa17.48■□□□□ 0.39
TRAF4-211ENST00000478021 TRBV9A0A0B4J1U6 114 aa17.47■□□□□ 0.39
TRAF4-211ENST00000478021 MARCH11A6NNE9 402 aa17.47■□□□□ 0.39
TRAF4-211ENST00000478021 REG1AP05451 166 aa17.47■□□□□ 0.39
TRAF4-211ENST00000478021 S100GP29377 79 aa17.47■□□□□ 0.39
TRAF4-211ENST00000478021 G6PCP35575 357 aa17.47■□□□□ 0.39
TRAF4-211ENST00000478021 PPP5CP53041 499 aa17.47■□□□□ 0.39
TRAF4-211ENST00000478021 EXOSC2Q13868 293 aaKnown RBP17.47■□□□□ 0.39
TRAF4-211ENST00000478021 TMEM229BQ8NBD8 167 aa17.47■□□□□ 0.39
TRAF4-211ENST00000478021 PRR25Q96S07 402 aa17.47■□□□□ 0.39
TRAF4-211ENST00000478021 PEF1Q9UBV8 284 aaKnown RBP17.47■□□□□ 0.39
TRAF4-211ENST00000478021 ZNF257Q9Y2Q1 563 aa17.47■□□□□ 0.39
TRAF4-211ENST00000478021 FAM223BA6NKX1 122 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 NPIPB5A8MRT5 1133 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 KRASP01116 189 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 PI3P19957 117 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 TBPP20226 339 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 TAS2R19P59542 299 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 OR2B8PP59922 312 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 ATP5G2Q06055 141 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 LHFPL1Q86WI0 220 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 FAM223AQ8IWN6 122 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 SMIM4Q8WVI0 70 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 COMMD5Q9GZQ3 224 aa17.46■□□□□ 0.39
TRAF4-211ENST00000478021 ZMAT5Q9UDW3 170 aaKnown RBP17.46■□□□□ 0.39
TRAF4-211ENST00000478021 RAB3DO95716 219 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 CD74P04233 296 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 ZP3P21754 424 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 PSMB6P28072 239 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 INSL3P51460 131 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 MRPS10P82664 201 aaKnown RBP17.45■□□□□ 0.38
TRAF4-211ENST00000478021 SCGB2B2Q4G0G5 96 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 FAAP20Q6NZ36 180 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 ACSM6Q6P461 480 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 ARRDC1Q8N5I2 433 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 MCFD2Q8NI22 146 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 NSG2Q9Y328 171 aa17.45■□□□□ 0.38
TRAF4-211ENST00000478021 STEAP1BQ6NZ63 245 aa17.44■□□□□ 0.38
TRAF4-211ENST00000478021 ZNF429Q86V71 674 aa17.44■□□□□ 0.38
TRAF4-211ENST00000478021 NECAP1Q8NC96 275 aa17.44■□□□□ 0.38
TRAF4-211ENST00000478021 FBXL7Q9UJT9 491 aa17.44■□□□□ 0.38
TRAF4-211ENST00000478021 LY86O95711 162 aa17.43■□□□□ 0.38
TRAF4-211ENST00000478021 CRYGCP07315 174 aa17.43■□□□□ 0.38
TRAF4-211ENST00000478021 CTRB1P17538 263 aa17.43■□□□□ 0.38
TRAF4-211ENST00000478021 C15orf32Q32M92 178 aa17.43■□□□□ 0.38
TRAF4-211ENST00000478021 CTRB2Q6GPI1 263 aa17.43■□□□□ 0.38
TRAF4-211ENST00000478021 HAPLN4Q86UW8 402 aa17.43■□□□□ 0.38
TRAF4-211ENST00000478021 FANCD2OSQ96PS1 177 aa17.43■□□□□ 0.38
TRAF4-211ENST00000478021 S4R3C0 116 aa17.43■□□□□ 0.38
TRAF4-211ENST00000478021 IGLC7A0M8Q6 106 aa17.42■□□□□ 0.38
TRAF4-211ENST00000478021 CTDSPLO15194 276 aa17.42■□□□□ 0.38
TRAF4-211ENST00000478021 NDUFB8O95169 186 aa17.42■□□□□ 0.38
TRAF4-211ENST00000478021 IGHV3-23P01764 117 aa17.42■□□□□ 0.38
TRAF4-211ENST00000478021 TNFSF8P32971 234 aa17.42■□□□□ 0.38
TRAF4-211ENST00000478021 SYNJ2BPP57105 145 aa17.42■□□□□ 0.38
TRAF4-211ENST00000478021 SSBP1Q04837 148 aaKnown RBP17.42■□□□□ 0.38
TRAF4-211ENST00000478021 KLF5Q13887 457 aaPredicted RBP17.42■□□□□ 0.38
TRAF4-211ENST00000478021 OR10W1Q8NGF6 305 aa17.42■□□□□ 0.38
TRAF4-211ENST00000478021 QTRT1Q9BXR0 403 aaKnown RBP17.42■□□□□ 0.38
TRAF4-211ENST00000478021 NXF2Q9GZY0 626 aaKnown RBP17.42■□□□□ 0.38
TRAF4-211ENST00000478021 ZNF256Q9Y2P7 627 aaPredicted RBP17.42■□□□□ 0.38
TRAF4-211ENST00000478021 TEX50A0A1B0GTY4 177 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 IGKV1-39P01597 117 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 IGKV1D-39P04432 117 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 DEFA4P12838 97 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 PIGPP57054 158 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 RND3P61587 244 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 RPEL1Q2QD12 228 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 MARCH1Q8TCQ1 289 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 OR4C12Q96R67 309 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 ELOVL1Q9BW60 279 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 HINT2Q9BX68 163 aa17.41■□□□□ 0.38
TRAF4-211ENST00000478021 RBM38Q9H0Z9 239 aaKnown RBP17.41■□□□□ 0.38
TRAF4-211ENST00000478021 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.4■□□□□ 0.38
TRAF4-211ENST00000478021 BMPR1BO00238 502 aa17.4■□□□□ 0.38
TRAF4-211ENST00000478021 SNAPC5O75971 98 aa17.4■□□□□ 0.38
TRAF4-211ENST00000478021 DHFRP00374 187 aa17.4■□□□□ 0.38
TRAF4-211ENST00000478021 OR1L8Q8NGR8 309 aa17.4■□□□□ 0.38
TRAF4-211ENST00000478021 OR13C8Q8NGS7 320 aa17.4■□□□□ 0.38
TRAF4-211ENST00000478021 TERB2Q8NHR7 220 aa17.4■□□□□ 0.38
TRAF4-211ENST00000478021 MRGPRFQ96AM1 343 aa17.4■□□□□ 0.38
TRAF4-211ENST00000478021 ZNF486Q96H40 463 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-211ENST00000478021 FAM212BQ9NTI7 297 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-211ENST00000478021 RABL2AQ9UBK7 228 aaPredicted RBP17.4■□□□□ 0.38
TRAF4-211ENST00000478021 RABL2BQ9UNT1 228 aa17.4■□□□□ 0.38
TRAF4-211ENST00000478021 OR51B2Q9Y5P1 312 aa17.4■□□□□ 0.38
TRAF4-211ENST00000478021 PPP5D1E7EU14 171 aa17.39■□□□□ 0.37
TRAF4-211ENST00000478021 FGF2P09038 288 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms