RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SRSF12Q8WXF0 261 aaKnown RBP12.09□□□□□ -0.47
SEC13-215ENST00000477547 MARVELD1Q9BSK0 173 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 SHPKQ9UHJ6 478 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 NSG2Q9Y328 171 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 FBXO7Q9Y3I1 522 aa12.09□□□□□ -0.47
SEC13-215ENST00000477547 MGAM2Q2M2H8 2515 aa12.08□□□□□ -0.47
SEC13-215ENST00000477547 CLPSL1A2RUU4 121 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 LINC01548A6NM66 108 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 C15orf61A6NNL5 157 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 PRAF2O60831 178 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 IL6RP08887 468 aaPredicted RBP12.08□□□□□ -0.48
SEC13-215ENST00000477547 VDAC1P21796 283 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 MAS1LP35410 378 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 RPL27AP46776 148 aaKnown RBP12.08□□□□□ -0.48
SEC13-215ENST00000477547 COMPP49747 757 aaPredicted RBP12.08□□□□□ -0.48
SEC13-215ENST00000477547 LYZL2Q7Z4W2 148 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 CADM3Q8N126 398 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 LRTM2Q8N967 370 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 OR4A16Q8NH70 328 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 ZNF431Q8TF32 576 aaPredicted RBP12.08□□□□□ -0.48
SEC13-215ENST00000477547 LSM10Q969L4 123 aaKnown RBP12.08□□□□□ -0.48
SEC13-215ENST00000477547 NOL4LQ96MY1 436 aaPredicted RBP12.08□□□□□ -0.48
SEC13-215ENST00000477547 PHB2Q99623 299 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 FAM103A1Q9BTL3 118 aaKnown RBP12.08□□□□□ -0.48
SEC13-215ENST00000477547 GPN1Q9HCN4 374 aaPredicted RBP12.08□□□□□ -0.48
SEC13-215ENST00000477547 LINC00527Q9UJ94 153 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 PRNDQ9UKY0 176 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 RNF114Q9Y508 228 aa12.08□□□□□ -0.48
SEC13-215ENST00000477547 A0A1B0GUS0 222 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 TMEM89A2RUT3 159 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 RBMXL2O75526 392 aaKnown RBP12.07□□□□□ -0.48
SEC13-215ENST00000477547 DHFRP00374 187 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 IL5P05113 134 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 FGF2P09038 288 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 MYOD1P15172 320 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 NMSQ5H8A3 153 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 STPG2Q8N412 459 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 KLHDC1Q8N7A1 406 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 MITD1Q8WV92 249 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 COMMD5Q9GZQ3 224 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 CACNG5Q9UF02 275 aa12.07□□□□□ -0.48
SEC13-215ENST00000477547 FOXA2Q9Y261 457 aaPredicted RBP12.07□□□□□ -0.48
SEC13-215ENST00000477547 OPN1MWP04001 364 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 IGF1P05019 195 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 HOXB5P09067 269 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 OPN1MW2P0DN77 364 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 OPN1MW3P0DN78 364 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 CRIP2P52943 208 aaPredicted RBP12.06□□□□□ -0.48
SEC13-215ENST00000477547 AWAT1Q58HT5 328 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 SGMS2Q8NHU3 365 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 CHPT1Q8WUD6 406 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 GPR146Q96CH1 333 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 FYTTD1Q96QD9 318 aaKnown RBP12.06□□□□□ -0.48
SEC13-215ENST00000477547 ZNF580Q9UK33 172 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 OR51B2Q9Y5P1 312 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 WSB1Q9Y6I7 421 aa12.06□□□□□ -0.48
SEC13-215ENST00000477547 TRAV41A0A0B4J266 112 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 A0A0B4J293 547 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 PSMB11A5LHX3 300 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 DBX1A6NMT0 343 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 ADAP1O75689 374 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 APELAP0DMC3 54 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 SULT1A3P0DMM9 295 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 SULT1A4P0DMN0 295 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 PROK1P58294 105 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 OXA1LQ15070 435 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 TATDN3Q17R31 274 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 THOC7Q6I9Y2 204 aaKnown RBP12.05□□□□□ -0.48
SEC13-215ENST00000477547 UNQ5815/PRO19632Q6UWF5 114 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 C12orf45Q8N5I9 185 aaPredicted RBP12.05□□□□□ -0.48
SEC13-215ENST00000477547 SPIN2AQ99865 258 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 SPIN2BQ9BPZ2 258 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 QTRT1Q9BXR0 403 aaKnown RBP12.05□□□□□ -0.48
SEC13-215ENST00000477547 TMEM14BQ9NUH8 114 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 TMED3Q9Y3Q3 217 aa12.05□□□□□ -0.48
SEC13-215ENST00000477547 G3V318 75 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 EGR2P11161 476 aaPredicted RBP12.04□□□□□ -0.48
SEC13-215ENST00000477547 SLC35B1P78383 322 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 SMCO1Q147U7 214 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 GGNBP1Q5YKI7 109 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 Q6ZRM9 215 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 UXS1Q8NBZ7 420 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 LFNGQ8NES3 379 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 OR1L8Q8NGR8 309 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 OR5B3Q8NH48 314 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 WFDC12Q8WWY7 111 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 PDCD10Q9BUL8 212 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 HINT2Q9BX68 163 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 GON7Q9BXV9 100 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 WNT10AQ9GZT5 417 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 FKBP11Q9NYL4 201 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 ZNF257Q9Y2Q1 563 aa12.04□□□□□ -0.48
SEC13-215ENST00000477547 A0A1B0GW64 132 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 A0A1W2PN81 502 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 MSGN1A6NI15 193 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 CGB1A6NKQ9 187 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 SNRPGP15A8MWD9 76 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 TEX22C9J3V5 150 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 CCSO14618 274 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 ST8SIA3O43173 380 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms