RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 BORCS7Q96B45 105 aa4.85□□□□□ -1.63
SPTLC3-205ENST00000476791 SSBP3Q9BWW4 388 aaPredicted RBP4.85□□□□□ -1.63
SPTLC3-205ENST00000476791 ARID1BQ8NFD5 2236 aaPredicted RBP4.85□□□□□ -1.63
SPTLC3-205ENST00000476791 CRB1P82279 1406 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 C10orf71Q711Q0 1435 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 QSER1Q2KHR3 1735 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 A6NDN8 102 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 DDTLA6NHG4 134 aaPredicted RBP4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 M0R1B8 84 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 SLC17A2O00624 439 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 NDUFB4O95168 129 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 SLC25A5P05141 298 aaKnown RBP4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 ZNF93P35789 620 aaPredicted RBP4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 MIDNQ504T8 468 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 TECRLQ5HYJ1 363 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 FAM201AQ5SY85 155 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 FKBP1CQ5VVH2 108 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 ZNF534Q76KX8 674 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 C1orf158Q8N1D5 194 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 CIARTQ8N365 385 aaPredicted RBP4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 C10orf126Q8N4M7 172 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 PAQR4Q8N4S7 273 aaPredicted RBP4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 OR1L3Q8NH93 324 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 OTOSQ8NHW6 89 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 EMC6Q9BV81 110 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 SIX2Q9NPC8 291 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 OTORQ9NRC9 128 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 RPRMQ9NS64 109 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 ALPK3Q96L96 1907 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 PLCH1Q4KWH8 1693 aa4.84□□□□□ -1.63
SPTLC3-205ENST00000476791 TRAV26-2A0A0B4J265 109 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 A0A1W2PPM0 123 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 MYBPHLA2RUH7 354 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 CREBL2O60519 120 aaPredicted RBP4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 ATP5G3P48201 142 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 Q499Y3 187 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 C9orf153Q5TBE3 101 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 SPATA12Q7Z6I5 190 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 ANKRD37Q7Z713 158 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 PCP2Q8IVA1 136 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 Q8N1Y9 231 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 ZFP62Q8NB50 900 aaPredicted RBP4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 ZPLD1Q8TCW7 415 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 APOBEC4Q8WW27 367 aaKnown RBP4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 TMEM125Q96AQ2 219 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 MS4A6EQ96DS6 147 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 FMC1Q96HJ9 113 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 FAM19A4Q96LR4 140 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 S1PR3Q99500 378 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 REEP1Q9H902 201 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 BCL2L10Q9HD36 194 aa4.84□□□□□ -1.64
SPTLC3-205ENST00000476791 USP54Q70EL1 1684 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 SAA2-SAA4A0A096LPE2 208 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 TRAV1-1A0A0B4J248 108 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 TCRBV5S2A0A599 114 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 H3BRM9 83 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 FCN1O00602 326 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 CHEK1O14757 476 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 CRXO43186 299 aaPredicted RBP4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 CECR9P0C854 216 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 TPT1P13693 172 aaKnown RBP4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 VDAC1P21796 283 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 SAA4P35542 130 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 PPP1CBP62140 327 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 DAZ2Q13117 558 aaKnown RBP4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 KIR3DS1Q14943 382 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 ZNF726P1Q15940 193 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 ACP7Q6ZNF0 438 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 DAZ4Q86SG3 579 aaKnown RBP4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 ZNF615Q8N8J6 731 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 LMX1AQ8TE12 382 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 BORCS8Q96FH0 119 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 PRELID3AQ96N28 172 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 PLA2G2FQ9BZM2 168 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 PBOV1Q9GZY1 135 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 BANF2Q9H503 90 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 DAZ1Q9NQZ3 744 aaKnown RBP4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 DAZ3Q9NR90 486 aaKnown RBP4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 SPANXCQ9NY87 97 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 PCTPQ9UKL6 214 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 KCNE3Q9Y6H6 103 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 SHANK3Q9BYB0 1731 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 F8W1H4 67 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 H7C1H1 209 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 STC2O76061 302 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 PPIBP23284 216 aaKnown RBP4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 DRD3P35462 400 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 ACVRL1P37023 503 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 OPRK1P41145 380 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 GFERP55789 205 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 TAF10Q12962 218 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 ZNF506Q5JVG8 444 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 SFRP4Q6FHJ7 346 aaPredicted RBP4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 Q6Q795 121 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 LINC00596Q86U02 117 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 PRIMA1Q86XR5 153 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 LINC00311Q8N616 119 aa4.83□□□□□ -1.64
SPTLC3-205ENST00000476791 OR4K17Q8NGC6 315 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms