RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PSG4Q00888 419 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 EBLN2Q6P2I7 272 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 Q6Q795 121 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 SEM1Q6ZVN7 128 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 RNF144BQ7Z419 303 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 PIP4P1Q86T03 277 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 LHFPL1Q86WI0 220 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 LRRC25Q8N386 305 aaPredicted RBP3.47□□□□□ -1.85
CD55-208ENST00000476590 C11orf44Q8N8P7 122 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 LMX1AQ8TE12 382 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 ZNF721Q8TF20 911 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 RAB37Q96AX2 223 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 FLYWCH2Q96CP2 140 aaKnown RBP3.47□□□□□ -1.85
CD55-208ENST00000476590 DUX3Q96PT4 197 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 OR2A5Q96R48 311 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 ABT1Q9ULW3 272 aaKnown RBP3.47□□□□□ -1.85
CD55-208ENST00000476590 LOXL2Q9Y4K0 774 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 CASP8AP2Q9UKL3 1982 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 SCN5AQ14524 2016 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 DOCK8Q8NF50 2099 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 KMT2EQ8IZD2 1858 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 LTBP4Q8N2S1 1624 aa3.47□□□□□ -1.85
CD55-208ENST00000476590 ZNF816-ZNF321PA0A0X1KG74 233 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 TMEM89A2RUT3 159 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 C2orf70A6NJV1 201 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 C9JAW5 83 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 FAM90A26D6RGX4 464 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 J3QLI3 93 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 HMGN4O00479 90 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 CRXO43186 299 aaPredicted RBP3.46□□□□□ -1.85
CD55-208ENST00000476590 ANGPTL7O43827 346 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 LDB3O75112 727 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 NEURL1O76050 574 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 APOMO95445 188 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 EPPINO95925 133 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 IGHV3-7P01780 117 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 CSN3P07498 182 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 SP1P08047 785 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 SMIM13P0DJ93 91 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 LINC00694P0DN24 101 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 CPMP14384 443 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 RPS28P62857 69 aaKnown RBP3.46□□□□□ -1.85
CD55-208ENST00000476590 SP4Q02446 784 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 ZNF90Q03938 601 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 GAGE2BQ13066 116 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 MYBPHQ13203 477 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 ANXA2RQ3ZCQ2 193 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 GAGE2EQ4V326 116 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 HLA-DQA1Q5Y7H0 255 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 FAM159AQ6UWV7 190 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 Q6ZS92 163 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 SH2D6Q7Z4S9 175 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 FAM19A2Q8N3H0 131 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 OR13A1Q8NGR1 328 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 TMEM171Q8WVE6 324 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 NPIPB3Q92617 1050 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 ARPC1AQ92747 370 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 NAT6Q93015 286 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 ZNF501Q96CX3 271 aaPredicted RBP3.46□□□□□ -1.85
CD55-208ENST00000476590 TMEM101Q96IK0 257 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 FOXB1Q99853 325 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 MRPL32Q9BYC8 188 aaKnown RBP3.46□□□□□ -1.85
CD55-208ENST00000476590 PRTFDC1Q9NRG1 225 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 RPRMQ9NS64 109 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 GAGE2DQ9UEU5 116 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 ANAPC10Q9UM13 185 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 HIGD1AQ9Y241 93 aa3.46□□□□□ -1.85
CD55-208ENST00000476590 A0A1W2PPV9 198 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 hDV102S1A0JD36 115 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 FAM24AA6NFZ4 105 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 TMEM262E9PQX1 116 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 TBL1XO60907 577 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 HSBP1O75506 76 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 SP9P0CG40 484 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 ATP1B2P14415 290 aaPredicted RBP3.46□□□□□ -1.86
CD55-208ENST00000476590 GABRG2P18507 467 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 PI3P19957 117 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 NKX2-1P43699 371 aaPredicted RBP3.46□□□□□ -1.86
CD55-208ENST00000476590 IER3P46695 156 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 DAP3P51398 398 aaKnown RBP3.46□□□□□ -1.86
CD55-208ENST00000476590 RPS24P62847 133 aaKnown RBP3.46□□□□□ -1.86
CD55-208ENST00000476590 ADIGQ0VDE8 80 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 CEACAM16Q2WEN9 425 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 GAGE13Q4V321 117 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 TMEM136Q6ZRR5 245 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 Q8N1Y9 231 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 LRTM2Q8N967 370 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 OR5C1Q8NGR4 320 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 OR1L8Q8NGR8 309 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 ZNRF2Q8NHG8 242 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 SCGB1C1Q8TD33 95 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 CLDN23Q96B33 292 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 C10orf35Q96D05 121 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 ADAT3Q96EY9 351 aaPredicted RBP3.46□□□□□ -1.86
CD55-208ENST00000476590 Q96M85 177 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 PRELID3AQ96N28 172 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 C1QTNF5Q9BXJ0 243 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 IL36BQ9NZH7 164 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 MDFICQ9P1T7 246 aa3.46□□□□□ -1.86
CD55-208ENST00000476590 VWA8A3KMH1 1905 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms