RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PRH1P02810 166 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 IL6RP08887 468 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-205ENST00000476387 ZNF735P0CB33 412 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 EXOSC2Q13868 293 aaKnown RBP12.43□□□□□ -0.42
COL1A1-205ENST00000476387 ZNF343Q6P1L6 599 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 SLC38A6Q8IZM9 456 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 NECAP1Q8NC96 275 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 DGCR14Q96DF8 476 aaKnown RBP12.43□□□□□ -0.42
COL1A1-205ENST00000476387 OR4C12Q96R67 309 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 ABHD1Q96SE0 405 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 ELOVL1Q9BW60 279 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 COMMD5Q9GZQ3 224 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 MIXL1Q9H2W2 232 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 AKIP1Q9NQ31 210 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 SLC2A9Q9NRM0 540 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 PEF1Q9UBV8 284 aaKnown RBP12.43□□□□□ -0.42
COL1A1-205ENST00000476387 KLK11Q9UBX7 282 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 MTFP1Q9UDX5 166 aa12.43□□□□□ -0.42
COL1A1-205ENST00000476387 MARCH11A6NNE9 402 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 UPK2O00526 184 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 CTDSP2O14595 271 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 RPA2P15927 270 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 UCP3P55916 312 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 MRPS10P82664 201 aaKnown RBP12.42□□□□□ -0.42
COL1A1-205ENST00000476387 ZNF45Q02386 682 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 ATP5G2Q06055 141 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 OR6Q1Q8NGQ2 317 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 DYNC2LI1Q8TCX1 351 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 RSRP1Q9BUV0 290 aa12.42□□□□□ -0.42
COL1A1-205ENST00000476387 C6orf62Q9GZU0 229 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-205ENST00000476387 TRBV9A0A0B4J1U6 114 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 E7EUB6 86 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 H3BMQ9 156 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 GABARAPH6UMI1 98 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 RBMXL2O75526 392 aaKnown RBP12.41□□□□□ -0.42
COL1A1-205ENST00000476387 OR2J3O76001 311 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 CD3DP04234 171 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 FGF2P09038 288 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 MYOD1P15172 320 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 PGAM2P15259 253 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 SPNP16150 400 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 LPAR6P43657 344 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 TAS2R19P59542 299 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 RPEL1Q2QD12 228 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 FAM209BQ5JX69 171 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 ARRDC1Q8N5I2 433 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 ISOC1Q96CN7 298 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 DIRAS2Q96HU8 199 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 ASCL2Q99929 193 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 RABL2AQ9UBK7 228 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-205ENST00000476387 RABL2BQ9UNT1 228 aa12.41□□□□□ -0.42
COL1A1-205ENST00000476387 A0A1B0GW64 132 aa12.4□□□□□ -0.42
COL1A1-205ENST00000476387 KRASP01116 189 aa12.4□□□□□ -0.42
COL1A1-205ENST00000476387 DEFA4P12838 97 aa12.4□□□□□ -0.42
COL1A1-205ENST00000476387 AREGP15514 252 aa12.4□□□□□ -0.42
COL1A1-205ENST00000476387 PSMB6P28072 239 aa12.4□□□□□ -0.42
COL1A1-205ENST00000476387 SSBP1Q04837 148 aaKnown RBP12.4□□□□□ -0.42
COL1A1-205ENST00000476387 IL18Q14116 193 aa12.4□□□□□ -0.42
COL1A1-205ENST00000476387 C15orf32Q32M92 178 aa12.4□□□□□ -0.42
COL1A1-205ENST00000476387 THOC7Q6I9Y2 204 aaKnown RBP12.4□□□□□ -0.42
COL1A1-205ENST00000476387 TBC1D26Q86UD7 250 aa12.4□□□□□ -0.42
COL1A1-205ENST00000476387 QTRT1Q9BXR0 403 aaKnown RBP12.4□□□□□ -0.42
COL1A1-205ENST00000476387 FAM212BQ9NTI7 297 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-205ENST00000476387 TRAV3A0A0B4J244 114 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 CCDC160A6NGH7 325 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 SNAPC5O75971 98 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 TRBV12-3P01733 135 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 REG1AP05451 166 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 CRYGCP07315 174 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 GP9P14770 177 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 HIST1H1BP16401 226 aaKnown RBP12.39□□□□□ -0.43
COL1A1-205ENST00000476387 CTRB1P17538 263 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 G6PCP35575 357 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 SYNJ2BPP57105 145 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 OR2B8PP59922 312 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 TATDN3Q17R31 274 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 CTRB2Q6GPI1 263 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 C19orf35Q6ZS72 473 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 TMEM229BQ8NBD8 167 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 SRSF8Q9BRL6 282 aaKnown RBP12.39□□□□□ -0.43
COL1A1-205ENST00000476387 FBXL7Q9UJT9 491 aa12.39□□□□□ -0.43
COL1A1-205ENST00000476387 CYB5BO43169 146 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 RAB3DO95716 219 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 PPP5CP53041 499 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 KLF5Q13887 457 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-205ENST00000476387 ZNF585BQ52M93 769 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 STEAP1BQ6NZ63 245 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 LHFPL1Q86WI0 220 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 OR9G4Q8NGQ1 327 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 OR1L8Q8NGR8 309 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 SMIM4Q8WVI0 70 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 ZNF486Q96H40 463 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-205ENST00000476387 TSC22D3Q99576 134 aa12.38□□□□□ -0.43
COL1A1-205ENST00000476387 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.37□□□□□ -0.43
COL1A1-205ENST00000476387 IGLC7A0M8Q6 106 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 CGB1A6NKQ9 187 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 C3orf84H3BNL1 204 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 CD74P04233 296 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 SERPINE2P07093 398 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 TRAPPC2P0DI81 140 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms