RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 AESQ08117 197 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 COA6Q5JTJ3 125 aaKnown RBP17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 HIST1H2BLQ99880 126 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 TMEM250H0YL14 139 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 IFNL4K9M1U5 179 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 IGKV1-5P01602 117 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 METTL15P1P0C7V9 234 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 PAX1P15863 534 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 DDTP30046 118 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 ARL16Q0P5N6 197 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 GAMTQ14353 236 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 ATP6V1FQ16864 119 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 TMEM241Q24JQ0 296 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 LBHQ53QV2 105 aaPredicted RBP17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 NCR3LG1Q68D85 454 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 HAPLN4Q86UW8 402 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 TAF15Q92804 592 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 VSIRQ9H7M9 311 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 SVEP1Q4LDE5 3571 aa17.1■□□□□ 0.33
SMIM11A-204ENST00000474455 MALRD1Q5VYJ5 2156 aa17.09■□□□□ 0.33
SMIM11A-204ENST00000474455 TRAV38-1A0A0B4J264 116 aa17.09■□□□□ 0.33
SMIM11A-204ENST00000474455 TNFRSF13BO14836 293 aaPredicted RBP17.09■□□□□ 0.33
SMIM11A-204ENST00000474455 KBTBD11O94819 623 aa17.09■□□□□ 0.33
SMIM11A-204ENST00000474455 MBP02144 154 aa17.09■□□□□ 0.33
SMIM11A-204ENST00000474455 PFN1P07737 140 aaKnown RBP17.09■□□□□ 0.33
SMIM11A-204ENST00000474455 IAPPP10997 89 aa17.09■□□□□ 0.33
SMIM11A-204ENST00000474455 EFNA4P52798 201 aa17.09■□□□□ 0.33
SMIM11A-204ENST00000474455 ZNF788Q6ZQV5 615 aa17.09■□□□□ 0.33
SMIM11A-204ENST00000474455 TMPRSS2O15393 492 aa17.08■□□□□ 0.33
SMIM11A-204ENST00000474455 MEF2BQ02080 365 aaPredicted RBP17.08■□□□□ 0.33
SMIM11A-204ENST00000474455 JOSD1Q15040 202 aaPredicted RBP17.08■□□□□ 0.33
SMIM11A-204ENST00000474455 OR4X1Q8NH49 305 aa17.08■□□□□ 0.33
SMIM11A-204ENST00000474455 COQ2Q96H96 371 aa17.08■□□□□ 0.33
SMIM11A-204ENST00000474455 OR4C12Q96R67 309 aa17.08■□□□□ 0.33
SMIM11A-204ENST00000474455 SMIM7Q9BQ49 75 aa17.08■□□□□ 0.33
SMIM11A-204ENST00000474455 SLC39A9Q9NUM3 307 aa17.08■□□□□ 0.33
SMIM11A-204ENST00000474455 FGF8P55075 233 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 SLC38A11Q08AI6 406 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 PDZD11Q5EBL8 140 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 TMEM14EPQ6UXP3 125 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 SSX7Q7RTT5 188 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 LHX4Q969G2 390 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 ACY3Q96HD9 319 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 MANBALQ9NQG1 85 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 CTSZQ9UBR2 303 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 IGLV2-14P01704 120 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 FGF7P21781 194 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 IL2RGP31785 369 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 PSMB3P49720 205 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 SDSLQ96GA7 329 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 OR5B12Q96R08 314 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 ACTR3CQ9C0K3 210 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 RBKSQ9H477 322 aa17.07■□□□□ 0.32
SMIM11A-204ENST00000474455 HECTD1Q9ULT8 2610 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 EDDM3AQ14507 147 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 BSXQ3C1V8 233 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 ZNF585BQ52M93 769 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 ZNF497Q6ZNH5 498 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 ZBTB34Q8NCN2 500 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 OR1P1Q8NH06 330 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 ANAPC16Q96DE5 110 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 SNX22Q96L94 193 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 DCTN5Q9BTE1 182 aa17.06■□□□□ 0.32
SMIM11A-204ENST00000474455 CTXND1A0A1B0GTU2 59 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 MRPS11P82912 194 aaKnown RBP17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 SSX9Q7RTT3 188 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 C16orf82Q7Z2V1 217 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 NOL4LQ96MY1 436 aaPredicted RBP17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 CHODLQ9H9P2 273 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 OR1A1Q9P1Q5 309 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 A0A087X0M5 115 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 A0A1B0GX30 115 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 LY86O95711 162 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 FAM3BP58499 235 aaPredicted RBP17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 ADIRFQ15847 76 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 UBALD1Q8TB05 177 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 PERPQ96FX8 193 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 SSX3Q99909 188 aa17.05■□□□□ 0.32
SMIM11A-204ENST00000474455 ITPR2Q14571 2701 aa17.04■□□□□ 0.32
SMIM11A-204ENST00000474455 H7BYZ3 331 aa17.04■□□□□ 0.32
SMIM11A-204ENST00000474455 GCGP01275 180 aa17.04■□□□□ 0.32
SMIM11A-204ENST00000474455 MSMO1Q15800 293 aa17.04■□□□□ 0.32
SMIM11A-204ENST00000474455 IZUMO4Q1ZYL8 232 aa17.04■□□□□ 0.32
SMIM11A-204ENST00000474455 SPANXN5Q5MJ07 72 aa17.04■□□□□ 0.32
SMIM11A-204ENST00000474455 PDLIM4P50479 330 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 RPL23P62829 140 aaKnown RBP17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 IL1F10Q8WWZ1 152 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 BTF3L4Q96K17 158 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 TMEM147Q9BVK8 224 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 HSPB7Q9UBY9 170 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 ZNF469Q96JG9 3925 aaPredicted RBP17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 PPP5D1E7EU14 171 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 VENTXO95231 258 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 HRASP01112 189 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 SRP14P37108 136 aaKnown RBP17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 CEACAM6P40199 344 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 GALR1P47211 349 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 ELLP55199 621 aaPredicted RBP17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 ATP5J2P56134 94 aa17.03■□□□□ 0.32
SMIM11A-204ENST00000474455 OR51G1Q8NGK1 321 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms