RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 RGPD5Q99666 1765 aa2.83□□□□□ -1.96
UBR3-208ENST00000474426 SCN2AQ99250 2005 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 SAA2-SAA4A0A096LPE2 208 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 A0A1W2PPM0 123 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 M0R2P5 195 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 BUB3O43684 328 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 SAA4P35542 130 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 MARCKSL1P49006 195 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 FBXW4P57775 412 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 GAGE2BQ13066 116 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 IL15RAQ13261 267 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 MLANAQ16655 118 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 C12orf74Q32Q52 190 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 GAGE2EQ4V326 116 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 UBE2NLQ5JXB2 153 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 RAB42Q8N4Z0 105 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 OR10AG1Q8NH19 301 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 TMEM125Q96AQ2 219 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 EEF1AKMT3Q96AZ1 226 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 S100A16Q96FQ6 103 aaKnown RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 APOOQ9BUR5 198 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 OTORQ9NRC9 128 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 GAGE2DQ9UEU5 116 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 WASHC3Q9Y3C0 194 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 CPS1P31327 1500 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 PATJQ8NI35 1801 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 EPM2AB3EWF7 344 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 SMKR1H3BMG3 65 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 MRPS12O15235 138 aaKnown RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 PAX4O43316 350 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 SLC25A5P05141 298 aaKnown RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 RFPL3SP0C7P2 107 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 SLC25A1P53007 311 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 RPS24P62847 133 aaKnown RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 SPEM2Q0P670 501 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 WFDC2Q14508 124 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 ADIRFQ15847 76 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 MPV17LQ2QL34 196 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 PLA2G2CQ5R387 149 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 SAMD5Q5TGI4 173 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 NLRC5Q86WI3 1866 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 OR4K13Q8NH42 304 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 SLC25A44Q96H78 314 aaPredicted RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 PYGO2Q9BRQ0 406 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 TMEM191AQ9H0A3 160 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 AIG1Q9NVV5 245 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 DNAJB12Q9NXW2 375 aaKnown RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 TRMT112Q9UI30 125 aaKnown RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 SPCS1Q9Y6A9 102 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 C2orf16Q68DN1 1984 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 CRYBG1Q9Y4K1 1723 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 TRDV1A0A1B0GX56 115 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 TMEM262E9PQX1 116 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 TMEM250H0YL14 139 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 GABARAPH6UMI1 98 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 H7C1H1 209 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 PRYO14603 147 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 PROSCO94903 275 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 NDUFB6O95139 128 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 NDUFC2O95298 119 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 GPANK1O95872 356 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 GHRHP01286 108 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 P0DMU3 169 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 FAM231AP0DMU4 169 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 FAM231CP0DMU5 169 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 VSIG8P0DPA2 414 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 CR2P20023 1033 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 GATA2P23769 480 aaPredicted RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 ATP4BP51164 291 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 ELOCQ15369 112 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 SH2D6Q7Z4S9 175 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 SPATA12Q7Z6I5 190 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 ZNF555Q8NEP9 628 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 OR4X2Q8NGF9 303 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 C2orf15Q8WU43 125 aaKnown RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 RERGLQ9H628 205 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 MPC1Q9Y5U8 109 aa2.82□□□□□ -1.96
UBR3-208ENST00000474426 CHCHD2Q9Y6H1 151 aaPredicted RBP2.82□□□□□ -1.96
UBR3-208ENST00000474426 ANKRD12Q6UB98 2062 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 RGPD2P0DJD1 1756 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 DPM2O94777 84 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 DUSP14O95147 198 aaKnown RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 NAPSAO96009 420 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 VDAC1P21796 283 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 PRDX1Q06830 199 aaKnown RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 FAM120AOSQ5T036 256 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 ZNF793Q6ZN11 406 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 COX8CQ7Z4L0 72 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 ATP6V0E2Q8NHE4 81 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 FGFBP3Q8TAT2 258 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 LINC00526Q96FQ7 95 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 SLC35B3Q9H1N7 401 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 ZNF256Q9Y2P7 627 aaPredicted RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 RNF114Q9Y508 228 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 ZC3H12DA2A288 527 aaKnown RBP2.81□□□□□ -1.96
UBR3-208ENST00000474426 NAP1L6A6NFF2 107 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 SNRPGP15A8MWD9 76 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 J3QL48 77 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 MT-ND6P03923 174 aa2.81□□□□□ -1.96
UBR3-208ENST00000474426 BCL2P10415 239 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms