RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, human

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-204	ENST00000474413	TSPAN5	P62079	268 aa		13.78	□□□□□ -0.2
EFNA1-204	ENST00000474413	KLK9	Q2XQG4	91 aa		13.78	□□□□□ -0.2
EFNA1-204	ENST00000474413	RNASE10	Q5GAN6	216 aa	Known RBP	13.78	□□□□□ -0.2
EFNA1-204	ENST00000474413	TBC1D26	Q86UD7	250 aa		13.78	□□□□□ -0.2
EFNA1-204	ENST00000474413	CD300LF	Q8TDQ1	290 aa		13.78	□□□□□ -0.2
EFNA1-204	ENST00000474413	BORCS5	Q969J3	196 aa		13.78	□□□□□ -0.2
EFNA1-204	ENST00000474413	FYTTD1	Q96QD9	318 aa	Known RBP	13.78	□□□□□ -0.2
EFNA1-204	ENST00000474413	KLK9	Q9UKQ9	250 aa		13.78	□□□□□ -0.2
EFNA1-204	ENST00000474413	C13orf42	A0A1B0GVH6	325 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	DBX1	A6NMT0	343 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	CTDSPL	O15194	276 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	REG1A	P05451	166 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	CRYGC	P07315	174 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	FGF2	P09038	288 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	CTRB1	P17538	263 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	TBP	P20226	339 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	CD40LG	P29965	261 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	LPAR6	P43657	344 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	CTRB2	Q6GPI1	263 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	ACSM6	Q6P461	480 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	CMTM1	Q8IZ96	169 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	ARRDC1	Q8N5I2	433 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	TMEM229B	Q8NBD8	167 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	HRASLS	Q9HDD0	168 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413	ZNF257	Q9Y2Q1	563 aa		13.77	□□□□□ -0.21
EFNA1-204	ENST00000474413		A0A0G2JLM5	398 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	BMPR1B	O00238	502 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	OR2J3	O76001	311 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	PSMB6	P28072	239 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	G6PC	P35575	357 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	EXOSC2	Q13868	293 aa	Known RBP	13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	IL34	Q6ZMJ4	242 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	HAPLN4	Q86UW8	402 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	SLC38A6	Q8IZM9	456 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	DIRAS2	Q96HU8	199 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	USMG5	Q96IX5	58 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	PRR25	Q96S07	402 aa		13.76	□□□□□ -0.21
EFNA1-204	ENST00000474413	FAM223B	A6NKX1	122 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	KRAS	P01116	189 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	TNFSF8	P32971	234 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	PPP5C	P53041	499 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	RND3	P61587	244 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	MRPS10	P82664	201 aa	Known RBP	13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	KLF5	Q13887	457 aa	Predicted RBP	13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	STEAP1B	Q6NZ63	245 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	FAM223A	Q8IWN6	122 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	NECAP1	Q8NC96	275 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	DMBX1	Q8NFW5	382 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	OR10W1	Q8NGF6	305 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	MCFD2	Q8NI22	146 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	SEC22A	Q96IW7	307 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	CCDC140	Q96MF4	163 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	NSG2	Q9Y328	171 aa		13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.75	□□□□□ -0.21
EFNA1-204	ENST00000474413	IGLV11-55	A0A075B6I3	123 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	GSTZ1	O43708	216 aa	Predicted RBP	13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	NOL3	O60936	208 aa	Known RBP	13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	NDUFB8	O95169	186 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	RAB3D	O95716	219 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	PTBP1	P26599	531 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	TAS2R19	P59542	299 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	SSBP1	Q04837	148 aa	Known RBP	13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	WT1-AS	Q06250	92 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	IL18	Q14116	193 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	C15orf32	Q32M92	178 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	CADM3	Q8N126	398 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	OR4C16	Q8NGL9	310 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	OR13C8	Q8NGS7	320 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	C15orf40	Q8WUR7	153 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	TP53RK	Q96S44	253 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	RANGRF	Q9HD47	186 aa	Predicted RBP	13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	PEF1	Q9UBV8	284 aa	Known RBP	13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413		V9GYH0	126 aa		13.74	□□□□□ -0.21
EFNA1-204	ENST00000474413	TEX50	A0A1B0GTY4	177 aa		13.73	□□□□□ -0.21
EFNA1-204	ENST00000474413	SAP30	O75446	220 aa		13.73	□□□□□ -0.21
EFNA1-204	ENST00000474413		P0C879	139 aa		13.73	□□□□□ -0.21
EFNA1-204	ENST00000474413	ECI1	P42126	302 aa		13.73	□□□□□ -0.21
EFNA1-204	ENST00000474413	LPCAT3	Q6P1A2	487 aa		13.73	□□□□□ -0.21
EFNA1-204	ENST00000474413	AIFM2	Q9BRQ8	373 aa		13.73	□□□□□ -0.21
EFNA1-204	ENST00000474413	QTRT1	Q9BXR0	403 aa	Known RBP	13.73	□□□□□ -0.21
EFNA1-204	ENST00000474413		S4R3C0	116 aa		13.73	□□□□□ -0.21
EFNA1-204	ENST00000474413	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	MFSD2B	A6NFX1	497 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	PGAM2	P15259	253 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	ZP3	P21754	424 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	INSL3	P51460	131 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	MFAP2	P55001	183 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	PIGP	P57054	158 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	SYNJ2BP	P57105	145 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	IZUMO4	Q1ZYL8	232 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	SLC25A42	Q86VD7	318 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	TERB2	Q8NHR7	220 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	MARCH1	Q8TCQ1	289 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	TRIM63	Q969Q1	353 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	NDUFA4L2	Q9NRX3	87 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	TMEM14B	Q9NUH8	114 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	FBXL7	Q9UJT9	491 aa		13.72	□□□□□ -0.21
EFNA1-204	ENST00000474413	LSM4	Q9Y4Z0	139 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 287.3 ms