RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 H0YIZ8 118 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 TOMM40O96008 361 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 HTN1P15515 57 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 IL11P20809 199 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 MST1P26927 711 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 ZNF658BQ4V348 819 aaPredicted RBP7.65□□□□□ -1.18
COL6A3-210ENST00000473258 ZC2HC1BQ5TFG8 222 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 TSKUQ8WUA8 353 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 PTH2Q96A98 100 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 IL23AQ9NPF7 189 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 PDLIM7Q9NR12 457 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 MPC1Q9Y5U8 109 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 SEC16AO15027 2179 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 PIN1P1O15428 100 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 C1orf195Q5TG92 126 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 NFAM1Q8NET5 270 aaPredicted RBP7.65□□□□□ -1.18
COL6A3-210ENST00000473258 VN1R2Q8NFZ6 395 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 GDF15Q99988 308 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 ABCA6Q8N139 1617 aa7.65□□□□□ -1.18
COL6A3-210ENST00000473258 A0A1W2PRD5 423 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 A0A1W2PRF3 423 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 A0A1W2PRM7 423 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 TMEM202A6NGA9 273 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 H7C1H1 209 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 KLRD1Q13241 179 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 CIARTQ8N365 385 aaPredicted RBP7.65□□□□□ -1.19
COL6A3-210ENST00000473258 ZDHHC16Q969W1 377 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 PRRC2BQ5JSZ5 2229 aaKnown RBP7.65□□□□□ -1.19
COL6A3-210ENST00000473258 ZFC3H1O60293 1989 aaKnown RBP7.65□□□□□ -1.19
COL6A3-210ENST00000473258 TRAV1-1A0A0B4J248 108 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 EDN1P05305 212 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 IGLL1P15814 213 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 C3orf56Q8N813 242 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 TNFRSF19Q9NS68 423 aa7.65□□□□□ -1.19
COL6A3-210ENST00000473258 SLC25A10Q9UBX3 287 aaPredicted RBP7.65□□□□□ -1.19
COL6A3-210ENST00000473258 SOCS3O14543 225 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 PNRC2Q9NPJ4 139 aaKnown RBP7.64□□□□□ -1.19
COL6A3-210ENST00000473258 DUOX1Q9NRD9 1551 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 TRBV5-7A0A0A0MS05 114 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 A0A0A6YYD5 115 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 IGKV6-21A0A0C4DH24 114 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 A0A1W2PS18 150 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 IGHV3-13P01766 116 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 IGHV3-7P01780 117 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 GZMMP51124 257 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 ORMDL2Q53FV1 153 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 LINC00596Q86U02 117 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 EEF1AKMT3Q96AZ1 226 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 SCRT1Q9BWW7 348 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 TMEM56-RWDD3S4R434 201 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 ICE1Q9Y2F5 2266 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 hCG_38984A0A1B0GV85 526 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 PTCRAQ6ISU1 281 aaPredicted RBP7.64□□□□□ -1.19
COL6A3-210ENST00000473258 CENPVQ7Z7K6 275 aaPredicted RBP7.64□□□□□ -1.19
COL6A3-210ENST00000473258 SIGLEC12Q96PQ1 595 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 NCOR1O75376 2440 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 LINC01549A6NIU2 74 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 CLDN14O95500 239 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 COX8AP10176 69 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 CCL2P13500 99 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 FOXF1Q12946 379 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 SPATA46Q5T0L3 261 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 Q6ZWC4 215 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 FMC1Q96HJ9 113 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 PRADC1Q9BSG0 188 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 UBL5Q9BZL1 73 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 SNED1Q8TER0 1413 aa7.64□□□□□ -1.19
COL6A3-210ENST00000473258 SHISA3A0PJX4 238 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 J3QW42 95 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 PPIFP30405 207 aaKnown RBP7.63□□□□□ -1.19
COL6A3-210ENST00000473258 LCNL1Q6ZST4 164 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 DEFB119Q8N690 84 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 ZNF525Q8N782 197 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 BMPERQ8N8U9 685 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 WFDC6Q9BQY6 131 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 M0QZQ0 153 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 NDUFB3O43676 98 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 ZIC3O60481 467 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 COL9A1P20849 921 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 AMTNQ6UX39 209 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 MDP1Q86V88 176 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 CYTL1Q9NRR1 136 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 FOXA2Q9Y261 457 aaPredicted RBP7.63□□□□□ -1.19
COL6A3-210ENST00000473258 IGHV1-24A0A0C4DH33 117 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 EDIL3O43854 480 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 CXCL13O43927 109 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 ZNF32P17041 273 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 SPEM2Q0P670 501 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 CDPF1Q6NVV7 123 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 SH2D6Q7Z4S9 175 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 CXorf67Q86X51 503 aaPredicted RBP7.63□□□□□ -1.19
COL6A3-210ENST00000473258 CXCL12P48061 93 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 GNB2P62879 340 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 METRNLQ641Q3 311 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 ADAMTSL4Q6UY14 1074 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 AGMATQ9BSE5 352 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 TWSG1Q9GZX9 223 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 ALKQ9UM73 1620 aa7.63□□□□□ -1.19
COL6A3-210ENST00000473258 IL18BPO95998 194 aa7.62□□□□□ -1.19
COL6A3-210ENST00000473258 IGHG4P01861 327 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms