RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 OR8D2Q9GZM6 311 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 IFI27L2Q9H2X8 130 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 MRPL16Q9NX20 251 aaKnown RBP3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 TVP23BQ9NYZ1 205 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 DNAJC12Q9UKB3 198 aa3.17□□□□□ -1.9
PRPF40A-206ENST00000471167 THSD7BQ9C0I4 1608 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 TRAV5A0A0B4J249 113 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 TMEM269A0A1B0GVZ9 245 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 J3QRK9 145 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 CD5LO43866 347 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 OR7C2O60412 319 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 SMIM10L2AP0DMW4 78 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 SMIM10L2BP0DMW5 78 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 BCL2P10415 239 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 NTF3P20783 257 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 CCR2P41597 374 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 LINC00313P59037 77 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 RPS25P62851 125 aaKnown RBP3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 PPP3R1P63098 170 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 SLC38A11Q08AI6 406 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 ELOCQ15369 112 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 RSPO1Q2MKA7 263 aaPredicted RBP3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 CASC10Q5T4H9 136 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 FKBP1CQ5VVH2 108 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 EBLN2Q6P2I7 272 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 Q6ZS49 121 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF429Q86V71 674 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 LRP11Q86VZ4 500 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 MKXQ8IYA7 352 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 C1orf174Q8IYL3 243 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 ZNF645Q8N7E2 425 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 GNPNAT1Q96EK6 184 aaPredicted RBP3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 ERMAPQ96PL5 475 aaPredicted RBP3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 OR2A5Q96R48 311 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 C11orf68Q9H3H3 251 aaKnown RBP3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 FBXL12Q9NXK8 326 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 TNFSF18Q9UNG2 199 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 AMMECR1Q9Y4X0 333 aaPredicted RBP3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 OVOS2A0A0G2JMS6 1433 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 TECPR2O15040 1411 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 XIRP1Q702N8 1843 aaKnown RBP3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 SCN10AQ9Y5Y9 1956 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 CDC42BPBQ9Y5S2 1711 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 DOCK5Q9H7D0 1870 aa3.16□□□□□ -1.9
PRPF40A-206ENST00000471167 LOC102724200A0A096LPH7 203 aaPredicted RBP3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 IGHV3-74A0A0B4J1X5 117 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 A0A0J9YXY3 114 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 DHRS12A0PJE2 317 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 H7BYZ3 331 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 CORTO00230 105 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 LST1O00453 97 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 OVOL1O14753 267 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 FSTL3O95633 263 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 NRASP01111 189 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 OPN1SWP03999 348 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF32P17041 273 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 CA7P43166 264 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 FKBP1AP62942 108 aaKnown RBP3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 TMEM241Q24JQ0 296 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 GLYATL3Q5SZD4 288 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 MRPL2Q5T653 305 aaKnown RBP3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 GLT8D1Q68CQ7 371 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 WDR59Q6PJI9 974 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF664Q8N3J9 261 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 SLC22A24Q8N4F4 322 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 LINC01555Q8NAE3 123 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 OR2M3Q8NG83 312 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 OR51T1Q8NGJ9 327 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 LMX1AQ8TE12 382 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 MS4A6EQ96DS6 147 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF799Q96GE5 643 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 CARD19Q96LW7 228 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 CCL13Q99616 98 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 PRADC1Q9BSG0 188 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 OR2J1Q9GZK6 312 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 IMUPQ9GZP8 106 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 LINC00597Q9H2U6 94 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 TAF9BQ9HBM6 251 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 TAAR3PQ9P1P4 343 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 NUFIP1Q9UHK0 495 aaKnown RBP3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 PCTPQ9UKL6 214 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 HS3ST2Q9Y278 367 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 HECW1Q76N89 1606 aa3.15□□□□□ -1.91
PRPF40A-206ENST00000471167 ATRNO75882 1429 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 TRDV1A0A1B0GX56 115 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 TMEM72A0PK05 275 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 C9JQL5 133 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 KRTAP4-16G5E9R7 235 aaPredicted RBP3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 J3QR89 54 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 COX7A2LO14548 114 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 DPM2O94777 84 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 HSPB1P04792 205 aaKnown RBP3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 FGF7P21781 194 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 S100A2P29034 98 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 OPRK1P41145 380 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 ZNF83P51522 516 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 PKIAP61925 76 aa3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 CEMP1Q6PRD7 247 aaPredicted RBP3.14□□□□□ -1.91
PRPF40A-206ENST00000471167 WDR86Q86TI4 376 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms