RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 OR1S1Q8NH92 325 aa13.96□□□□□ -0.17
RPL39-202ENST00000468844 TMEM167AQ8TBQ9 72 aa13.96□□□□□ -0.17
RPL39-202ENST00000468844 FBXL15Q9H469 300 aa13.96□□□□□ -0.17
RPL39-202ENST00000468844 PRDM13Q9H4Q3 707 aa13.96□□□□□ -0.17
RPL39-202ENST00000468844 GSX1Q9H4S2 264 aaPredicted RBP13.96□□□□□ -0.17
RPL39-202ENST00000468844 METTL1Q9UBP6 276 aaKnown RBP13.96□□□□□ -0.17
RPL39-202ENST00000468844 TCF19Q9Y242 345 aa13.96□□□□□ -0.17
RPL39-202ENST00000468844 SIGLEC9Q9Y336 463 aa13.96□□□□□ -0.17
RPL39-202ENST00000468844 SETD2Q9BYW2 2564 aaPredicted RBP13.96□□□□□ -0.17
RPL39-202ENST00000468844 UPK2O00526 184 aa13.96□□□□□ -0.18
RPL39-202ENST00000468844 RRHO14718 337 aa13.96□□□□□ -0.18
RPL39-202ENST00000468844 RBMXL2O75526 392 aaKnown RBP13.96□□□□□ -0.18
RPL39-202ENST00000468844 IER3P46695 156 aa13.96□□□□□ -0.18
RPL39-202ENST00000468844 PJVKQ0ZLH3 352 aa13.96□□□□□ -0.18
RPL39-202ENST00000468844 CXorf66Q5JRM2 361 aaPredicted RBP13.96□□□□□ -0.18
RPL39-202ENST00000468844 TMEM219Q86XT9 240 aa13.96□□□□□ -0.18
RPL39-202ENST00000468844 CCDC28AQ8IWP9 274 aa13.96□□□□□ -0.18
RPL39-202ENST00000468844 FAM71E2Q8N5Q1 922 aa13.96□□□□□ -0.18
RPL39-202ENST00000468844 TEX45Q8NA69 505 aa13.96□□□□□ -0.18
RPL39-202ENST00000468844 OR4A16Q8NH70 328 aa13.96□□□□□ -0.18
RPL39-202ENST00000468844 ZNF430Q9H8G1 570 aaPredicted RBP13.96□□□□□ -0.18
RPL39-202ENST00000468844 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.96□□□□□ -0.18
RPL39-202ENST00000468844 NCBP2LA6PVI3 153 aaKnown RBP13.95□□□□□ -0.18
RPL39-202ENST00000468844 SCGB1D2O95969 90 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 IGHV4-59P01825 116 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 MYOD1P15172 320 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 AP2S1P53680 142 aaPredicted RBP13.95□□□□□ -0.18
RPL39-202ENST00000468844 RAB14P61106 215 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 RAB32Q13637 225 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 LY6EQ16553 131 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 AARDQ4LEZ3 155 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 Q6YL49 198 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 ZNF429Q86V71 674 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 PPP1R27Q86WC6 154 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 FOXRED2Q8IWF2 684 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 QTRT1Q9BXR0 403 aaKnown RBP13.95□□□□□ -0.18
RPL39-202ENST00000468844 TMEM14BQ9NUH8 114 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 KIAA1456Q9P272 454 aa13.95□□□□□ -0.18
RPL39-202ENST00000468844 HMSDA8MTL9 139 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 MBPP02686 304 aaPredicted RBP13.94□□□□□ -0.18
RPL39-202ENST00000468844 NKX2-1P43699 371 aaPredicted RBP13.94□□□□□ -0.18
RPL39-202ENST00000468844 RPL8P62917 257 aaKnown RBP13.94□□□□□ -0.18
RPL39-202ENST00000468844 TOR2AQ5JU69 321 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 OR4A5Q8NH83 315 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 ST8SIA3O43173 380 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 ID3Q02535 119 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 C5orf64Q2M2E5 130 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 Q8N9W7 124 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 ZDHHC16Q969W1 377 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 RBM14Q96PK6 669 aaKnown RBP13.94□□□□□ -0.18
RPL39-202ENST00000468844 SLC25A33Q9BSK2 321 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 HSPB7Q9UBY9 170 aa13.94□□□□□ -0.18
RPL39-202ENST00000468844 FOXA2Q9Y261 457 aaPredicted RBP13.94□□□□□ -0.18
RPL39-202ENST00000468844 TRAV14DV4A0A0A6YYC5 116 aa13.93□□□□□ -0.18
RPL39-202ENST00000468844 A6NDX4 124 aa13.93□□□□□ -0.18
RPL39-202ENST00000468844 SSBP2P81877 361 aaPredicted RBP13.93□□□□□ -0.18
RPL39-202ENST00000468844 PLGLAQ15195 96 aa13.93□□□□□ -0.18
RPL39-202ENST00000468844 COMMD7Q86VX2 200 aa13.93□□□□□ -0.18
RPL39-202ENST00000468844 CLCC1Q96S66 551 aa13.93□□□□□ -0.18
RPL39-202ENST00000468844 MAGT1Q9H0U3 335 aa13.93□□□□□ -0.18
RPL39-202ENST00000468844 RCL1Q9Y2P8 373 aaKnown RBP13.93□□□□□ -0.18
RPL39-202ENST00000468844 FCN1O00602 326 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 OR2F2O95006 317 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 PSMB6P28072 239 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 S100A10P60903 97 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 TNFRSF9Q07011 255 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 PRSS8Q16651 343 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 MMD2Q8IY49 270 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 SIGLECL1Q8N7X8 197 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 C1RLQ9NZP8 487 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 CDC42EP3Q9UKI2 254 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 PRNDQ9UKY0 176 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 LSM5Q9Y4Y9 91 aaKnown RBP13.92□□□□□ -0.18
RPL39-202ENST00000468844 FAM90A26D6RGX4 464 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 E7EUB6 86 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 H0YIZ8 118 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 K7EPK0 472 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 HOXA3O43365 443 aaPredicted RBP13.92□□□□□ -0.18
RPL39-202ENST00000468844 OPN1MWP04001 364 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 FGF2P09038 288 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 OPN1MW2P0DN77 364 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 OPN1MW3P0DN78 364 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 S100A11P31949 105 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 POLR2GP62487 172 aaKnown RBP eCLIP13.92□□□□□ -0.18
RPL39-202ENST00000468844 PCNPQ8WW12 178 aaKnown RBP13.92□□□□□ -0.18
RPL39-202ENST00000468844 PITPNC1Q9UKF7 332 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 OR51B2Q9Y5P1 312 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 POMT1Q9Y6A1 747 aa13.92□□□□□ -0.18
RPL39-202ENST00000468844 JMJD1CQ15652 2540 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 INAFM1C9JVW0 142 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 CHST1O43916 411 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 CA2P00918 260 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 C10orf55Q5SWW7 151 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 OR5R1Q8NH85 324 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 SSMEM1Q8WWF3 244 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 ZNF257Q9Y2Q1 563 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 MOB4Q9Y3A3 225 aa13.91□□□□□ -0.18
RPL39-202ENST00000468844 TEX50A0A1B0GTY4 177 aa13.9□□□□□ -0.18
RPL39-202ENST00000468844 ARPC5O15511 151 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms